Bifidobacterium scardovii: BBSC_1864
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Entry
BBSC_1864 CDS
T03975
Name
(GenBank) putative transposase
Organism
bsca
Bifidobacterium scardovii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_21
HTH_Tnp_1
rve_2
rve_3
HTH_28
Phage_terminase
HTH_29
HTH_23
Herpes_BLRF2
Motif
Other DBs
NCBI-ProteinID:
BAQ31944
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Position
2234535..2236106
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AA seq
523 aa
AA seq
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MAKYTREQRQRAVELYAKYECCAAGVIRELGYPSREALRMWHRDWLGEQETGVPSQRGER
YARYTEERKRAAVDHYLTHGRRASRTMRQMGYPSKEVLVSWIDELAPGERRIRRGPVPGE
SKRDAVLKVASGELSSREAAEVVGVDSSVVRNWKRQLLGAAKGLMVAKREPERGGSSPQD
DPDALRGEVSALNADLERLRAEYRAMEIRLAIVKGAAELVGKEPGADPDNLTSREKTTLI
KDISETLGVNAESLLKEVGIKRGTYYYQLKAMRRPDRNASLLSLVREAFENSRRRYGYKR
IHLELKSAGIIVSAKRIMRLMTSHGMVPVSRSAKRCSSYKGEIGGAPANLVNRDFHATAP
NRLWVTDITEFPIPAGKVYLSPVIDCYDGMPVAWTIGTSPNAALANGMLETACATLRPGE
TPVIHSDRGCHYRWPEWIRICKSHGLTRSMSAKGCSPDNAAAEGFFGRLKNEFYYGRDWS
GVGYEEFHERLAAYLTHYNETRIKKSLDWLSPVQYRKHLGMAA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtacacgagggaacagcggcaacgcgcggtcgagctgtatgcgaaatacgag
tgctgcgcggcgggtgtgatacgcgagctggggtatcccagccgggaggcgttgcgcatg
tggcaccgggactggctcggcgaacaggagacgggcgtgccctcgcagcggggtgaacgg
tatgcgcgctacacggaggagcggaagcgtgcggccgtggaccattatctgacgcatggg
cggcgtgcgagccgcacgatgcgccaaatggggtatccgagcaaagaggtgctcgtttcg
tggatcgacgagctcgcgccgggcgaacgccggattcgccgtggcccggttcccggggaa
tcgaaacgggatgcggtcctgaaggtcgcgtccggcgaattgagttcgcgcgaggccgcg
gaggtggtgggagtggattcgtcggtcgtgcgaaactggaagcgtcaactgctcggagcc
gcgaaaggactcatggtggcgaagagggaaccggaacgcgggggttcctcgccgcaggac
gatccggacgcgctgcgcggcgaggtctccgcgctgaacgcggatctggagcgattgcgc
gccgaataccgggcgatggagatcaggttggcgatcgtgaagggcgcggcggaactggtg
ggaaaagagccgggcgcagacccggacaacctgacaagccgagagaagacgaccctgatc
aaggacatcagtgagacgttgggcgtgaacgcggagagcctgctgaaggaggtcggcatc
aagcgcggcacgtactactaccagttgaaggccatgcgccggccggacaggaacgcgagc
ctcctgtccctggtgcgcgaggcgttcgagaacagcaggaggcgttacgggtacaagcgc
atccacctcgagctcaaaagcgcgggcatcatcgtgtcggccaagcgcatcatgcgcctg
atgaccagccacggcatggtccccgtgtccaggagcgcgaagcgctgcagttcgtacaag
ggcgagatcggcggcgcgcccgccaatctcgtgaaccgcgacttccacgccaccgcgccg
aaccggctgtgggtcacggacatcaccgagttcccgatcccggcgggcaaggtgtacctg
tcgccggtcatcgactgctatgacggcatgccggtcgcctggacgatcggcacgagcccc
aacgccgccctggccaacgggatgctcgagaccgcgtgcgccacgctcaggcccggcgag
actccggtcatccactcggaccgtggctgccactaccggtggcccgaatggatccgcatc
tgcaaaagccacgggctgacccggtcgatgagcgcgaagggctgttcgccggacaatgcg
gccgcggaggggttcttcggccgtctcaagaacgagttctattacgggcgggactggagt
ggcgtgggctacgaggagttccatgagcgcctggccgcctacctgacccactacaatgaa
accaggatcaagaagtcactggactggctaagccccgtgcaataccgcaaacaccttgga
atggccgcctga
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