Bifidobacterium scardovii: BBSC_1904
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Entry
BBSC_1904 CDS
T03975
Name
(GenBank) transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
bsca
Bifidobacterium scardovii
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bsca03000
]
BBSC_1904
Transcription factors [BR:
bsca03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BBSC_1904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
HTH_24
Sigma70_r4_2
HTH_23
HTH_Tnp_ISL3
HTH_3
Sigma70_r4
HTH_10
MerR
TetR_N
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BAQ31984
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Position
2279612..2280655
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AA seq
347 aa
AA seq
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MTTMKEIAEQTGVSVSTVSLVLNNRDAGRVKPRIAARVRETAQRLGYTSNPLARSLRTGK
TRILGFISEEIATTPYAGGIILGAQDAASALGYMLLTVNTDGATNEDDEIATLKRYGVDG
FMYAKMSNRYADVPDSLGDYPLVLVDATDRAGQFPSIEPDEFRIAYDATARLIGAGCERI
AYVGCSEPMIAQDGRLEGYRRALEDAGRDYDDRLVANVLNNGPALRDVSDLFDRACPDGF
FCFNDARAWYVYECAARRGLTIGKDVSVVGVDNHRVFAETFYPQLTTVELPHYEMGYWAT
CKLVSMIEQRDLHDLALPRTTAPLPPLDAPIPAKIHCTLIEKESVRG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgatgaaggagatcgcagagcagacgggggtgtcggtgtccaccgtctccctg
gtgctgaacaaccgtgacgccggccgggtcaagccccggatcgcggcgagggtgcgcgag
accgcccaacggctgggctacacgtcgaatccgctggcccggtccctgcgcaccggcaag
acgcgcatcctcggcttcatcagcgaggagatcgccaccacgccgtacgccggcggcatc
atcctcggcgcgcaggacgcggccagcgccctcgggtacatgctgctgaccgtcaacacc
gacggcgcgaccaacgaggacgacgagatcgccacgctcaagcggtacggcgtggacggc
ttcatgtacgcgaagatgtcgaaccggtacgccgacgtgccggacagcctcggggactat
ccgctcgtcctggtcgacgccaccgaccgcgccgggcagttccccagcatcgagcccgac
gagttccgcatcgcgtacgacgcgacggcgcggctgatcggcgcgggctgcgagcgcatc
gcgtacgtcgggtgctcggagccgatgatcgcccaggacgggcggctcgaggggtaccgc
cgcgcccttgaggatgcggggcgggactacgacgatcggctcgtcgccaacgtgctcaac
aacggcccggccctgcgggacgtgagcgacctgttcgaccgggcctgccccgacggattc
ttctgcttcaacgacgcgcgcgcgtggtacgtgtacgaatgcgcggcgcggcgcggcctg
accatcggcaaggacgtgtcggtggtcggcgtcgacaaccaccgcgtgttcgcggagacc
ttctacccgcagctgaccaccgtggagctgccgcattacgagatgggctactgggcgacg
tgcaagctcgtgtcgatgatcgagcagcgcgacctgcacgatctggcgctgccgcgcacc
accgcgcccctgccgccgctggacgccccgatcccagcgaagatccactgcacgctcatc
gaaaaggaatccgtgcgcggctga
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