Bifidobacterium scardovii: BBSC_1916
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Entry
BBSC_1916 CDS
T03975
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBSC_1916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsca03400
]
BBSC_1916
DNA repair and recombination proteins [BR:
bsca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBSC_1916
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BBSC_1916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
BAQ31996
LinkDB
All DBs
Position
complement(2294794..2295522)
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AA seq
242 aa
AA seq
DB search
MPLYRDEGVVLRTAKLGEADRIITMLTRGHGKIRAVAKGARRVKSRFGARLEPFMRVDVL
IATGRTLDVVSQAESIAAYAAPIAVDYDAYTAASVVAETIDRLVAAEHERVPAQYQLLIG
ALHALAKGAHRPQAIGDSYVMRALALAGWAPRLGSCVVCGEPVETSTAIYCSIAAGGVMC
AADRTPEARKYDPATIRQFAALVRGDWGVLDAEALTGETRRLVEEWSEYYMERPIRSLRL
LD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgtaccgtgacgaaggcgtggtgctgcgaacggcgaagctgggcgaggccgac
cgcatcatcaccatgctcacccgtgggcacggcaagatccgggcggtggccaagggggcg
cggcgggtcaaatcgcggttcggcgcccggctcgagccgttcatgcgcgtcgatgtgctc
atcgccacggggcgcacgctcgacgtggtctcgcaggctgagtccatcgccgcatacgcc
gcgccgatcgctgtcgattacgacgcctacacggcggccagcgtcgtggcggagaccatc
gatcggctcgtcgcggccgaacacgagcgggtgccggcccagtaccagctgctcatcggc
gcgctgcatgcgctggccaagggggcgcaccggccgcaggccatcggcgattcgtacgtg
atgcgcgcactggcgttggcgggatgggcgccgagacttgggtcgtgcgtggtgtgcggc
gagccggtggagacgtcgacggcgatctactgctcgatcgcggccggtggcgtgatgtgc
gcggccgaccgtacgccggaggcgcgcaaatacgatccggcgaccatacgccagttcgcg
gcgttggtccggggcgactggggcgtgctggacgccgaggcgctgaccggcgagacgcgc
cgcttggtggaggagtggagtgagtactacatggagcggccgattcgttcactgcgcttg
ctagattag
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