KEGG   Bifidobacterium scardovii: BBSC_2166
Entry
BBSC_2166         CDS       T03975                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
bsca  Bifidobacterium scardovii
Pathway
bsca03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bsca00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    BBSC_2166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsca03019]
    BBSC_2166
   03009 Ribosome biogenesis [BR:bsca03009]
    BBSC_2166
   03036 Chromosome and associated proteins [BR:bsca03036]
    BBSC_2166
Enzymes [BR:bsca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     BBSC_2166
Messenger RNA biogenesis [BR:bsca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BBSC_2166
Ribosome biogenesis [BR:bsca03009]
 Eukaryotic type
  90S particles
   RNase
    BBSC_2166
 Prokaryotic type
  rRNA processing factors
   BBSC_2166
Chromosome and associated proteins [BR:bsca03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     BBSC_2166
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2
Other DBs
NCBI-ProteinID: BAQ32246
LinkDB
Position
2611964..2612692
AA seq 242 aa
MTTTTTESPSTAAHISPSNVLLEALGTTIRPELLVQALTHRSFSHEHPGALNYERLEFLG
DAVLELVSTETLFAAHPDMSEGQLAKMRAKAVSEESLSAIARTKLNVGPYILLGHGEAEQ
GGSEKSSILCDIVESLIGATFLEHGIDGAREVVHRLIDDTLAEVATEGPALDWKTSLEIK
SHQLGKGDPHYRMAVTGPEYAQIFTARALLGDDDTVYGVGKGSSKRKAQLAAAEAAWKAL
DK
NT seq 729 nt   +upstreamnt  +downstreamnt
atgactacgacgaccaccgaatccccctcgaccgctgcgcacatctcaccatccaacgtg
ctgttggaagcgctgggcaccaccatccggcccgagctgctggtgcaagccctcacccac
cgctcgttctcgcacgagcatccgggcgcgctgaactacgagcgtctggagtttctcggc
gacgcggtgctcgagctcgtgtccacggagacgctgttcgccgcccatcccgacatgagc
gagggccagctggcgaagatgcgagccaaggccgtgtccgaggagtcgctgagcgccatc
gccaggaccaagctcaacgtcgggccgtacatcctgctcggccacggcgaggccgagcag
ggcggctcggagaagagctcgatcctgtgcgacatcgtggaatcgctgatcggcgcgacc
ttcctcgagcacggcatcgacggcgcgcgcgaggtcgtgcaccggctcatcgacgacacg
ctggccgaggtagccaccgagggcccggcgctcgactggaagacctcgctggagatcaaa
tcgcaccagctcggcaagggcgacccgcactaccggatggccgtcacggggccggaatac
gcgcagatcttcaccgcccgcgcgctgctcggcgacgatgacaccgtatacggcgttggc
aaagggtccagcaagcgcaaggcgcagctggccgccgccgaagccgcgtggaaggcgctg
gacaagtag

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