Bifidobacterium scardovii: BBSC_2333
Help
Entry
BBSC_2333 CDS
T03975
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca03030
DNA replication
bsca03430
Mismatch repair
bsca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBSC_2333
03430 Mismatch repair
BBSC_2333
03440 Homologous recombination
BBSC_2333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsca03032
]
BBSC_2333
03400 DNA repair and recombination proteins [BR:
bsca03400
]
BBSC_2333
Enzymes [BR:
bsca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBSC_2333
DNA replication proteins [BR:
bsca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBSC_2333
DNA repair and recombination proteins [BR:
bsca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBSC_2333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
AAA_2
Motif
Other DBs
NCBI-ProteinID:
BAQ32413
LinkDB
All DBs
Position
complement(2825817..2829353)
Genome browser
AA seq
1178 aa
AA seq
DB search
MRALDEGKLTHAYLFSGPRGCGKTSSARILARCINCVKGPTSHPCGECESCKDLATGGPG
SIDVVEIDAASHNGVDDARELRERAGFAPARDRYKIFILDEAHMVTQQGFNALLKIVEEP
PEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVPAEVMGPYLETICEKEGIKPEPGVLKLA
MRAGGGSMRDTLSVLDQLMVGSVNGVISHDSAVALLGFTPEALIGEAVDAVIDRNGEALY
GVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLAGDRAESVLSDTAEGENMGDLHRQASAL
GLPVLTSMADIINTTLGNMTGAISPRMRLELLAARLLAGRENAGAGAGIGGGSASAGSFG
GASAGAGAGTPGEGAPAPAQRGGFAGSSRRGGFAGASRNQQGNAGAASAQNHPQSAAPTA
LRACNQGQPPAAHSGATVVASSPTDATGVRYTARPASGGGKSWATSDAETTAGKASAPVR
AGGAASASEDAGGVAAAGVAGGQTDSGQSAAAETAATSTVSSAWGANQGEAAPHQGASGS
GTPAPQSGSDQAAGATPHGGSAQSGTRNQAPVPAWGSHSPSAGAAQQGTSSQGQASQGQS
SQGQPAASAGASAAGVPSGPDNRTPDQKWDAAVASLPEEIREYVSRDKVPTVAFETNAMG
KSRLSMTFDRALSQHAFALAVATDEENSGKKASIVVLEAVRKQFGAATMIAPTPVAANGE
KVESTRRMTPEQLTQVKKQIALAKAGLAAAGLMNFGSARKPSESREQHAAKAEDASAADA
DDASHRAGGTHSASGAATPGEPSGAGDARPVTSGQATVTQGASGSSTRGISRKTEVAGAA
AGSSVDPRDENPHTADDHAAGAANAHDASAGVNDDEEDPWLRPSSASVQSSVQSDAETRP
SERPVVSAQDRQSTAARQDSASSTSMPAAQTPSAGEGHHTKHVAVPDLSDDTDPWAAPAQ
AKASPATGAAMTAPAVPKTAVGGADPWQQPNQAASAPANAAPEVDPWQQGPAVATDPWAN
QQVPPPEEAPMDDDPWGQQPSAPRGGRSSFRDGGRPGTPAQGMADDSWGQTAGTPAAAPA
GFAEPNASGMRPGGLGNVVAGVGAGTGRGAATPGTPASTPSVDPDEDEYSMSDESLGSAT
AMSLDDLKKFFEVKKTENFAADDPKNPRNIAQSNKHDD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgctcgacgagggcaaactcacgcatgcctacctgttttccgggccgcgcggc
tgcggcaagaccagctccgcccgcatccttgcccgctgcatcaactgcgtcaagggcccg
acctcgcacccgtgcggcgagtgcgaaagctgcaaggatctggccaccggaggcccgggg
tcgatcgacgtggtcgagatcgacgcggcgtctcacaacggcgtcgacgatgcccgcgag
ctgcgcgagcgcgcagggttcgcgccggcccgcgaccgatacaagatcttcattctcgac
gaggcccacatggtcacgcagcagggcttcaacgcgctgctcaagattgttgaggagccg
ccggaacacgtcatgttcatcttcgcgacgaccgaaccggacaaggtgatcggcacgatt
cgctcgcgcacccaccattatccgttccgcttggtgcccgccgaggtgatggggccgtat
ctggagacgatctgcgagaaggagggcatcaagccggagcccggcgtgctcaagctcgcg
atgcgcgccggtggcggctcgatgcgcgatacgctttccgtgcttgaccagttgatggtc
gggtccgtgaacggtgtgatctcgcacgattccgctgtggcgctgcttggattcacgccg
gaggccttgatcggcgaggcggtcgacgcggtgatcgaccgcaacggcgaagccctgtac
ggggtgattcagaaggttgtggtcggcggcttcgatccgcggcggttcgtcgaggatctg
ctggcgcgcgtgcgtgatctgctggtgctgacgctggcgggcgaccgcgccgaatcggtg
ctgagcgacaccgccgagggcgagaacatgggggacctgcatcggcaggcgtctgcgctc
ggtctgccagtgctgacttcgatggcagacattatcaatacgacgttgggcaatatgacc
ggcgcgatttcgccgcgcatgcgcctggagctgctcgccgcgaggctgctcgccggtcgg
gagaacgccggggctggcgccggcattggcggcggttccgcgtccgctggatcgtttgga
ggggcatcggctggagccggcgctggcacgccgggagagggggctcccgcccctgcccag
cgtggcggttttgccggatcgtcgcgtcgtggtggattcgccggtgcctcgcgtaatcag
caggggaatgcgggtgctgcttcggcgcagaaccacccccagtcggctgcgccgacagcc
ctccgggcctgcaatcagggacagcctccggccgcgcattccggcgcgactgtcgtcgcg
tcctcgcctacggacgccaccggcgtccgctacacggctcggcccgccagcgggggcggg
aagtcgtgggcgacatccgatgcggaaacaactgcggggaaggcgtcggctccggttcgt
gccggtggcgcggcctccgctagtgaggatgccggtggcgtggccgccgctggcgtggcg
ggtggccagacggactccggccaatccgccgccgctgagactgctgcgacttcgactgtt
tcttcggcttggggagcgaaccaaggcgaggctgcgccgcatcagggtgcatccggttcg
ggaactccggcgccgcaatcggggtcggaccaggcggcgggggcgaccccgcatggtggt
tcggcgcaatccggcacccggaatcaggccccggtcccggcgtggggaagccatagcccg
tccgctggcgcggcccagcaaggtacttcgtcccaaggtcaggcgtcccaaggccagtca
tctcagggacagccggcggcttcggccggtgcgtcggctgcgggtgttccgtccggaccg
gacaatcgcacgccagaccagaagtgggatgccgcggtggcgtcgctacccgaggaaatc
cgcgaatatgtgtcccgcgacaaggtgccgaccgtggcgttcgagacgaatgcgatgggc
aagtcccgcctgtccatgaccttcgaccgggcgctcagccagcatgcgttcgcgctggcc
gttgccacggatgaggaaaacagcggcaagaaggcgtcgatcgttgtgcttgaggcagtg
cgcaagcagttcggcgccgccaccatgatcgccccgactccggttgcggcgaacggcgag
aaggtcgaatccaccaggcgcatgactcccgagcagctgacgcaggtcaagaagcagatc
gcactggccaaggccggtttggccgccgcggggctgatgaatttcggatctgctcgcaag
ccgtcggagtcgcgcgaacagcatgcggccaaggccgaggatgcgtcagcggcggatgct
gatgacgccagccatcgagccggcggaactcattcggcatccggggcggcgacgcccggg
gaaccgtccggcgcgggcgatgcccggccggtgacatccggtcaggcgacggtgactcag
ggagcctccggatcatcgacgcgtggtatttcgcgaaagactgaggttgcgggagcggcc
gctggctcgtcggtcgatcctcgtgacgagaatccgcatactgcggacgatcatgcggcg
ggagcggcgaacgcgcacgacgcgtccgccggcgtgaatgacgatgaggaggatccgtgg
ctgcgcccgtcctcggcgtcggttcagtcgtcggttcagtcggatgcggagacgcggccg
tccgaacgtcccgtcgtctcggcgcaggaccgtcagagcacggcggcgcggcaggactcg
gcgtcatcgacctcgatgcccgccgcacagacgccatccgcgggggagggtcaccatacc
aagcatgtcgccgtaccggatctgagtgatgacaccgacccgtgggcggcgccggcccaa
gcgaaggcatcgccggcgaccggggccgccatgacggcacctgccgtgccgaagaccgct
gttggcggtgccgatccgtggcagcagccgaatcaagccgcctcggcaccggcgaacgcc
gctccggaggtggatccgtggcagcaggggccggccgtggcgactgatccctgggcgaat
cagcaggttcctccgcccgaggaagcaccgatggatgatgacccgtggggtcagcagccg
tccgctccccgcggtgggcgttcctcgttccgtgatgggggccgcccgggaacgccggcg
cagggcatggcggatgattcgtgggggcagacggctggaacgccggccgcggctccggcc
ggtttcgccgaaccgaatgcatcgggcatgcgaccgggcggcttgggcaatgtggttgcc
ggtgtaggtgccggtacgggccggggtgcagccactcccggtacgccggccagcacgccg
agcgttgaccccgatgaggacgagtattcgatgagcgacgagtcgctcggctccgcgacc
gcgatgagtctcgacgatctcaaaaagttcttcgaggtcaagaaaaccgagaatttcgcc
gccgacgaccccaagaaccccagaaacatcgcgcaatccaacaagcacgacgactga
DBGET
integrated database retrieval system
