Bifidobacterium scardovii: BBSC_2412
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Entry
BBSC_2412 CDS
T03975
Name
(GenBank) putative alpha-L-rhamnosidase
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca00946
Degradation of flavonoids
bsca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
BBSC_2412
Enzymes [BR:
bsca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
BBSC_2412
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Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
BAQ32492
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All DBs
Position
complement(2932694..2935204)
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AA seq
836 aa
AA seq
DB search
METMTLKAHMIAGPDGCIADPETGMRRPPVFLRAFDADAGSVSARLVVSAWGLAECEING
TKVGGDVLTPGWTVYGKRLPHWTYDVSDLIRAGRNVMTFWMGDGWYRGKIGFGGGKQDCY
GSRLGLFAQLEIAGRDGDTRVIASNADDGLWRAANGPILCSDLYEGETYDARMALPQIEG
EAGASVPPDSEEEASGLAVGKIASRWEPVEELPFDPSVLFPAQQATAVRCIGEHDPQSIT
RLPDGRWLVDFGQNCTQRVVLRIPAVPAGHAITLQHVEVVNPDGTPATRPLRRASQRDRY
IASGRESAGEPTWWEPRFTMHGFRYAVIDGWPDGSDLTGADLHARVYSSARRRTGWFSCS
NGMLNRLHENARWSMLSNFVSIPTDCPQRDERFGWTGDIAVFAPSAEYLYDVADFLDSWL
RDAAIETDIWGTVPYYVPYPYDGWGKPSAVALWGDAVTMVPWALYQATGDAEALRRHIPL
ARRWMDEVAGLLSEDGVWDARPDTWCGQLGDWLDPTAPPDDAARAMTEKNLVATAFAAHS
ATLVAAMLRAAGEDTADGGATGADAARYEALAGHIRAGFRARFLRPGGRMTSDTQCAYAL
AIALDLFDGDPSRDRLRAEAGTRLAELVRERGFVVGTGFAGTPYVLDALADTGHADEAFS
LLLSDRCPSWLYQVRMGATTTWERWDSMLPNGEVNPGDMTSFNHYAFGSVADWMHRAIGG
LAATRAGWREVRIAPRIAAAVAHGLTRAETSHITPYGKVSVSWSVADGGREAARVAGCGE
GDGADRPRPAADLSVAVPEGVTAVLGMDALDERGIALHAGIRLNAGEHRLRVLADR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggagacgatgacgttgaaggcgcatatgatcgcggggccggatggatgcattgccgat
ccggagacgggcatgcgccgcccgccggtgttcctgcgcgcgttcgacgccgatgccggg
tcggtttcggccaggctcgtcgtcagcgcgtggggactggccgaatgcgagatcaacggg
accaaggtcggcggagatgtgctgacccccggttggacggtgtacggcaagcgtctgccg
cactggacttatgacgtttccgatctgatccgcgccggtcggaacgtgatgaccttctgg
atgggcgacggctggtaccgaggcaaaatcggattcggcggcggaaagcaggactgctac
ggcagccgactcggcctgttcgctcagctggagatcgccggccgggacggggacacgcgt
gtgatcgccagcaacgccgacgatgggctgtggcgtgcggctaacgggccgattctgtgc
agcgacctgtacgaaggcgaaacgtacgatgcgcgcatggctttgccgcaaatcgagggc
gaggctggggccagcgtgccgcctgattccgaagaagaggcgtcagggcttgcggtgggc
aagatcgcttctcgttgggagccggtcgaggagctgccgtttgatccctccgtcctgttc
cccgcacagcaggccacggccgtccgctgcatcggcgagcatgatccgcagtcgatcacc
cgattgcccgacgggcggtggttggtggatttcggccagaattgcactcagcgggtcgtg
ctacgcatccccgcggtgccggccggccacgccatcaccctgcagcatgtcgaggtcgtc
aatccggatggcactccggcgacgcggccgctgcgccgcgcctcgcagcgtgaccggtac
attgcgtcgggccgcgaatcggccggcgaacccacttggtgggaaccgcggttcacgatg
cacggttttcgctacgcggtgatcgacggatggcccgatggctccgacttgacgggcgcc
gatctgcacgcccgcgtctacagctccgcccgccgccgcacggggtggttctcctgctcg
aatgggatgctgaaccggctgcatgagaatgcccgctggtcgatgctgtcgaacttcgtc
tcgatccccaccgactgcccgcagcgcgacgagcgcttcgggtggaccggcgatatcgcc
gtgttcgcgccgagtgccgaatacctgtacgacgtcgccgattttctggacagctggctg
agggatgcggccatcgaaaccgacatctggggcacggtgccgtattacgtgccgtatccg
tacgacggttggggcaaaccatccgccgtggcgctgtggggcgacgccgtgacgatggtg
ccgtgggccctataccaggccacgggcgacgccgaggcgctgcgcaggcatattccgctt
gcgcgccgctggatggacgaggtcgcgggcctgctgtccgaggatggcgtgtgggacgcc
cggccggatacctggtgcggccagctcggcgactggctcgacccgaccgctccgcccgac
gacgcggcccgtgcgatgaccgagaagaatctggtcgccacggcgttcgccgcgcactcg
gccacgctggtggcggccatgctgcgggcggccggcgaggatacggctgatgggggtgcg
accggggcggacgccgcccgatacgaggcgctggccgggcatatccgggccgggttccgg
gcccggttcctgcgaccgggcggccgcatgacctcggacacgcagtgcgcgtatgcgctg
gccatcgcgctggatctgttcgacggcgatccctcccgggaccgtctgcgggccgaggcc
ggcacccggttggcggagctggtgcgggagcgcggctttgtcgtgggcacgggattcgcc
ggcacgccatacgtgctggatgcgctggccgataccggtcatgcggatgaggcgttctcg
ctgctgctgtccgaccggtgcccctcatggctgtatcaggtgcgcatgggcgccaccacc
acatgggagcgatgggattcgatgctgccgaacggcgaggtgaatcccggcgacatgacc
tccttcaaccactacgcgttcggttcggtggccgattggatgcatcgggcgatcggcggc
ttggcggcgacccgtgccgggtggcgtgaggtgcgcatcgccccacggatcgccgcggcc
gtggctcatggcctgacccgtgccgaaacctcgcatatcacgccatatggcaaggtttcg
gtctcgtggtcggtggcggatggcggcagggaagcggcccgggttgccgggtgcggcgaa
ggcgatggcgccgatcggcctcggccggctgccgatctgtccgtcgcggtgcccgaaggc
gtcacggccgtgctcggcatggatgctcttgacgagcggggaatcgcgctccacgccggc
atccggctgaatgcgggagagcaccggctgcgcgtgcttgcggaccgttag
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