Bartonella schoenbuchensis: AAJP84_02015
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Entry
AAJP84_02015 CDS
T10346
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bsch Bartonella schoenbuchensis
Pathway
bsch03410
Base excision repair
bsch03430
Mismatch repair
bsch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAJP84_02015 (recJ)
03430 Mismatch repair
AAJP84_02015 (recJ)
03440 Homologous recombination
AAJP84_02015 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsch03400
]
AAJP84_02015 (recJ)
DNA repair and recombination proteins [BR:
bsch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AAJP84_02015 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAJP84_02015 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAJP84_02015 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
CDC45
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
XAM20122
LinkDB
All DBs
Position
complement(446091..447875)
Genome browser
AA seq
594 aa
AA seq
DB search
MQLPYYCLNVKSSACDQAWVDPLNIQGINNARAISQKFGFPDQLARVLAARNVDESEAVS
FINPTLRNLLPNPESFTDMQCAAERLVKAIMNREKIAVFGDYDVDGACSSALLARFLRYF
GIIVKIYIPDRIVEGYGPNEQAMKMLAQEGASLIITVDCGANSPDAIKAARLAGADVVVL
DHHQMSDVHQEAVALVNPNRPDDFSEQGHLCAAGIVFVTLVWVNHLLRKQKWTETVPDLL
SMLDLVALATVCDVVPLRGVNRAFVVKGLQVARSMHNVGIAALAKVARIGEPINSFHLGF
LLGPRINAGGRIGDQALGARLLSCDNRDEADKMAEQLNKLNQERQEMEAIQLAQAEAYID
SVHHDKEMSSSLVVACQEWHPGIVGILASRLKERFFCPVFVIALKADGSGTGSGRSISGV
DLGALVHEAVTLNLLEKGGGHSMAAGITIQSTKVEAFREWLEEKVSLVVSQLRAKKSLSI
DGFLSASGANKDLFDMIEKAGPFGSENATPVFVLPSHRLVSVCEVGKGHLRLFVSDLEGK
KLQGIAFHAVGTSLGNFLSENVGETIHVAGNLSLNYWNGTIKPQLRVIDAAAVA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcagttaccctattattgtctcaatgttaaatcttctgcttgtgatcaagcttgggtg
gatcctcttaatattcaagggatcaacaatgctcgtgctatttctcaaaaatttggtttt
ccagatcaattagctcgggttcttgctgcaagaaacgttgatgaatctgaagctgtttct
tttattaatcccacgctacgcaatctattgcctaatccagaaagctttacggatatgcaa
tgtgcagcagagcgcttggttaaagctattatgaaccgagagaaaatagctgtttttggt
gattatgacgttgatggagcttgttcatcagcgcttttggcacgttttttacgttatttt
ggtataatagttaaaatctatattcctgatcgtatcgttgagggctatggtccaaatgaa
caagcaatgaagatgctagcccaagaaggggcgagtttaattattaccgttgattgtggt
gcaaacagtccagatgcaataaaggcagctaggcttgcaggtgctgatgttgtagtttta
gatcatcaccaaatgtcagacgttcatcaggaggctgttgctcttgttaaccctaatcgc
cctgatgatttttctgaacaagggcatttatgtgctgctggcatcgtatttgttacatta
gtatgggtaaatcatttactgcgaaagcaaaaatggacagagactgttcctgaccttttg
agtatgcttgatcttgttgcattagccactgtatgcgatgtggttccattgcgaggtgtt
aatcgcgcttttgtagtaaaagggcttcaagtagcgcgttctatgcataatgtcgggata
gctgctttagcaaaggttgcacgtataggtgagccaattaacagttttcatttaggtttt
ttattagggcctagaattaatgcgggagggcgcattggagaccaagctttgggagcacgc
ttgctcagttgtgataatagagatgaagctgataaaatggcagagcaattaaataagctt
aatcaggaacgtcaagaaatggaagctattcaattagctcaagcagaagcttatattgat
tctgttcatcacgataaagaaatgtcgtcatcacttgttgttgcttgtcaagaatggcac
ccaggaattgttggtattcttgcatctcgtttaaaagaacgttttttttgtcctgttttt
gtaattgctttaaaagcagatggtagcggtacagggtcagggcgttcaattagtggtgtg
gatttgggtgcacttgttcatgaagctgttacattaaacttattagaaaaagggggaggg
catagtatggcagctgggattacaattcaatctacgaaagttgaagcttttcgagaatgg
ttagaagaaaaggtttctttagtagtttcgcaattgcgtgctaaaaagtctcttagtata
gatggctttctttctgcttctggtgctaataaagatctttttgatatgattgaaaaagca
ggcccttttggttcggaaaatgctacacctgtttttgttcttccttctcatagattggtc
agtgtatgtgaggttgggaaagggcatttacgcctttttgtttctgatcttgaaggcaaa
aaactccaaggaatagcttttcatgcagtgggaacatcccttggcaattttctttctgaa
aatgttggagaaacaattcatgtagcaggtaatcttagtttaaattattggaacggaact
atcaaaccacaattgcgtgttattgacgcagcagcagtggcttga
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