Bartonella schoenbuchensis: AAJP84_02205
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Entry
AAJP84_02205 CDS
T10346
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsch Bartonella schoenbuchensis
Brite
KEGG Orthology (KO) [BR:
bsch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsch03032
]
AAJP84_02205 (topA)
03400 DNA repair and recombination proteins [BR:
bsch03400
]
AAJP84_02205 (topA)
Enzymes [BR:
bsch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AAJP84_02205 (topA)
DNA replication proteins [BR:
bsch03032
]
Prokaryotic type
DNA Topoisomerases
AAJP84_02205 (topA)
DNA repair and recombination proteins [BR:
bsch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AAJP84_02205 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XAM20157
LinkDB
All DBs
Position
483302..485851
Genome browser
AA seq
849 aa
AA seq
DB search
MDIVIVESPAKAKTINKYLGPQYKVVASFGHVRDLSAKDGSVLPDQDFAMKWDIDTASAK
RLNEIAKAVKEADSLILATDPDREGEAISWHILDVLNQKKVLKDKPVKRVVFNAITKKSV
LDAMNNPRDIDISLVDAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRIICDR
ESEIEHFIKEDYWSITTSLKTIRDDNFYARLVAFNQEKLGKLDIKSLEQAEKIRSMLEEA
EYRALNVEAKPIKRNPSPPFTTSTLQQAASSKLGFSPSRTMRIAQKLYEGVEINGETSGL
ITYMRTDGVQMATEAIDSARKVIKESFGNNYVPQKPRFYSTKAKNAQEAHEAIRPTDFQR
NPNQIRNFLDSDQAKLYELIWKRAIASQMCSAEIERTTVEIQAIQGENNANLRATGSVIR
FDGFISAYTDQRDEENSEDDESARLPHINANEALTKEKVEVTQHTTEPPPRYSEASLIKK
LEELGIGRPSTYASILAILSERGYTVTDKRKLVPDAKGRIVTAFLESFFNRYVEYDFTAN
LEEKLDLISDGKLAWKDVLHDFWNEFNASVTDIQKLRITHVLDALNVILAPLAFPTREDG
SDPRSCPLCTNGQLSLKLGRYGAFVGCSNYPECKYTRQLGIDTGEESEAVRSDEPLVLGV
DPETGKDIFLCTGRFGSYIQLGQDKGAKRVGLPKEWARKNIDLNQALSLLSLPREIGAHP
ETGKIITATIGRYGPYLSHDGKSANLSDINEVFEIGINRAVTVLAEKQENKTKRGRTTPE
ALITLGEHPEGGTVTVRDGRYGLYVNWGKINATLPKDKDPADVTLSEALDLLLAKASAPK
KGQRVNRKK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgttatcgtcgaatctccagctaaagcaaagacaattaataaatatcttgga
cctcaatataaagtagtagcatcatttgggcatgtgcgtgatttgtctgcaaaagatggc
tcggttctacctgatcaagattttgccatgaaatgggatatcgatactgcttctgcaaaa
cgtttaaacgaaatagcaaaagcagttaaagaagctgatagtcttattttggcaacagac
cccgaccgtgaaggggaagccatttcatggcacattcttgatgttcttaatcaaaaaaaa
gttttaaaggataaacctgttaaacgggttgttttcaacgcaatcactaaaaaatctgta
cttgatgctatgaataatccgcgtgatattgatatatcgctcgttgatgcttaccttgcg
cgccgcgctcttgattatctggttggttttacactttcacctgttttatggcgtaaacta
ccaggttcccgttcagctggtcgtgttcaatcggttgctttacgtattatttgcgatcgc
gaatcagaaatagaacatttcattaaagaagattactggtcgattacaacatccttaaaa
acgattcgagatgataatttttacgcgcgactggtagcatttaaccaagaaaaacttgga
aagcttgatattaaatccttagaacaagcagaaaaaatccgctccatgctggaggaggca
gaatatcgtgctttaaatgttgaagcaaaacctataaaaagaaatccttccccaccattt
acaacatccacgttacagcaagctgcctcttcaaaattaggtttctctccttctcgtact
atgcgaattgcacaaaaactttatgaaggtgttgaaattaatggtgaaacatcaggtctt
atcacttatatgcgtacagatggtgtacaaatggcaacagaagccattgattcagcacga
aaagtgattaaagaatcctttggtaataactatgttcctcaaaaaccacgtttttattca
acaaaagcaaaaaatgcacaagaagcgcatgaagctattcgcccaacagattttcaacgc
aaccccaatcaaatacgcaattttcttgatagtgatcaagcaaaattatatgaattgata
tggaaacgcgctattgcaagccaaatgtgttctgctgaaattgaacgtacaacagttgaa
attcaagcgattcaaggagaaaataatgcaaatttgcgtgcaacagggtctgttattcgc
tttgatggttttatttctgcctataccgatcaacgagatgaagaaaatagtgaagatgat
gaatcagcgcgcctaccccacatcaacgctaatgaagcactaacaaaagaaaaagttgag
gtaactcaacacactacagagccccctccccgttattctgaagcttcattaatcaaaaaa
cttgaagaattgggtattggtcgcccttcaacttatgcctctatattagcgatactttct
gaacgtggctatactgtaactgataaacgaaagcttgttcctgatgctaaaggacgtatt
gtcacagcttttcttgaaagtttctttaaccgttatgtagagtacgactttacagcaaat
cttgaagaaaaactcgatcttatatcggatggaaaactagcttggaaagatgttttacat
gacttttggaatgaatttaatgcatccgttaccgatatccagaaattgcgtataacgcat
gtccttgatgccttaaacgtaatattagcacctcttgcttttcctacgcgtgaagatgga
agtgatccccgatcttgtcctctttgtacaaatggccagttatcgctaaaattagggcgt
tatggtgcatttgttggctgttccaattatcctgaatgcaaatatacacgccaacttggt
atagatacaggagaagaaagtgaagctgtgcgcagtgacgagcctcttgtacttggcgtt
gatcctgaaacgggaaaagatatctttctttgcactggtcgctttggttcatatattcaa
cttggtcaagataaaggagcaaaacgtgtagggctaccaaaagagtgggcaagaaaaaat
attgatcttaatcaagccctatctttgctatctcttccccgtgaaattggagctcaccct
gaaacaggaaaaataatcacagccacaatcgggcggtatggcccctatctttctcatgac
ggaaaatctgcaaatctttctgatatcaatgaagtttttgaaattggtatcaatcgtgct
gttacagtgttagctgaaaaacaagaaaataaaacaaaacggggccggacaacacctgaa
gcactgatcacattaggtgagcacccagaaggtggaactgtcactgtgcgcgatggacgt
tatggtttgtatgtaaattggggaaaaattaatgccacattaccaaaagataaagacccc
gctgatgtaacactttcagaagcattagaccttctcttggccaaagcatccgctcctaaa
aaagggcaaagagtgaataggaaaaaatag
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