Bartonella schoenbuchensis: AAJP84_05115
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Entry
AAJP84_05115 CDS
T10346
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bsch Bartonella schoenbuchensis
Brite
KEGG Orthology (KO) [BR:
bsch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsch03400
]
AAJP84_05115 (addB)
Enzymes [BR:
bsch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAJP84_05115 (addB)
DNA repair and recombination proteins [BR:
bsch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AAJP84_05115 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
GvpD_bR2
Motif
Other DBs
NCBI-ProteinID:
XAM20476
LinkDB
All DBs
Position
1224911..1228042
Genome browser
AA seq
1043 aa
AA seq
DB search
MTRKPRVFSISPGTSFLPHFVDALLSGTLIDDFAPNGDIQAALVDTLIYVPTRRAARALR
AAFTERSHTRSSFLPTIRPLGDMDEESSFFVENHDSILTLNPPIKESERLLLLARLIRPW
RENLPAHLRAIFGTEDVLIPANTADAIWLAQDLASLMDEVETESADWSKLKDICPDMVAE
WWQITLDFLTIITQNWPQILKEKQRSNPVEWRNQALKIQADILHRTQPNKPIIVAGATGS
IPAVAHLSKVVAYLPKGAVVLPGLDLYMDEAQWDALGTMNKDTTTLDCFDHALGAFSHPQ
YHLKKFLSLMKCQRIHVSEIGQRSIMQTKRAAIVSEALRPVSTTDQWAQIVRDDYENVCA
DWSLIEASNEREEALAISIALRNAIEEPQKIAALITNDRNLARRVVAELQRFGIEANDSG
GIPLAHTLPATLLRLLLENVFKPGDPIAFLSLLKHPLTILGQNRQRLREIVENFELFVLR
GNPNHINLCECDQFLETWVQTYSYNMSDNCPLDPQKTEEARSLCHLLVKAVEPLASLIKQ
DKECTITEVARATVEAFENFGRDDNNSFVHLYQNEAGKALSIFLHELVSDQSGLKFHLYE
WPAMFSALIATRCVSPSPGGHPRLFIWGTLESRLQTVDTVVLGSLNEGFWPSTTRNDAFL
SRPMKMTLTLEPPEKRIGLAAHDFQWAMGMNKVVMSRATRVNHIPSVPSRWLQRLETVVG
KQVWKKICSRGETFLHWAKMLDKTDTIGFTPRPCPVPPLDMRPRHFSVTEIETLRYNPYA
IYAKKILRLKPLKALIYSPYAADRGILYHAILATFCTQIKDPNVAHALATFLSIGRKEFD
KLNLPPDIKAIWWSIFENFAPFFIKWEQNLGPRKRHVEVAAQKTPIGTTGVTLSGRADRI
DILPDKMVEILDFKTNTPPSSKQVRALLHPQLALEAALLMQGAFTDFQDLTPSNLFYVPL
KGKGPIKSKSIISYQKKAKDQTSAVLLGQEAWKRLITLIEYYQNPQQGYLSHALPSPHRY
EGDYDHLARLSEWSSNFYKAGSS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtaaaccgcgtgtattttctatttctcctggaacttcttttttgcctcatttt
gttgatgcacttctctcaggtacccttattgatgactttgcaccaaatggagatatccaa
gctgcgcttgttgatacccttatttatgtaccaacacggcgtgctgctcgcgctttacgt
gcagcctttactgaaagaagtcatacacggtcgagctttttgcccactatccgcccttta
ggagatatggatgaagaaagttctttttttgttgaaaatcatgatagtattttaacactc
aatccccctattaaagaaagtgaacgtcttctccttctagcacgccttattcgtccctgg
cgtgaaaatctgccagcccatttgcgtgctatatttggtacagaagatgtgctcattcct
gctaataccgctgatgcaatttggcttgctcaagatttagcaagcttgatggatgaagtt
gaaacagaatctgcagattggtcaaaacttaaagatatctgccctgatatggttgctgaa
tggtggcaaattactttagattttttaactattattacacaaaattggcctcaaatttta
aaggaaaaacaacgaagcaatccggttgaatggcgcaaccaagcactcaaaatacaagca
gacattttacaccgcacacaacctaataaacctattatcgttgctggtgcaacaggttct
attcctgcagttgcccatctttcaaaagtggttgcctacctgcccaaaggagccgttgtt
ctcccagggcttgatctttatatggatgaagcgcaatgggatgcattaggcacaatgaat
aaagatacaacaactcttgattgttttgatcatgctcttggtgcttttagtcaccctcaa
tatcatttaaagaaatttttatctcttatgaaatgtcaacgcattcatgtgagtgaaatt
ggccaaagaagtataatgcaaacaaaacgcgctgccattgtatcagaagcgctacgaccc
gtttctactacagatcaatgggcacaaatcgtgcgtgatgattatgaaaatgtttgcgca
gattggtcactgattgaagccagtaatgaacgcgaagaagctttagctatttctattgct
ttacgtaatgccattgaagaacctcaaaaaattgcagctcttattactaatgaccgcaat
ttagcacgccgtgttgtcgctgaattacagcgatttgggattgaagcaaatgattcaggt
ggaataccacttgcacatacattacctgcaaccctattacgactgctgttagagaatgta
tttaagcctggtgatcctatcgcctttctatctcttcttaaacatccactcacaattcta
ggacaaaatcgtcaacgtttacgtgaaatagtagaaaattttgaattatttgttcttcga
ggcaatcctaatcatatcaacctttgcgaatgtgatcaatttcttgaaacatgggtgcaa
acatattcctataatatgtctgacaactgcccccttgatccacaaaaaaccgaagaggca
cgatcgctttgtcaccttttggttaaagcagttgaaccactagcgtctttgataaaacag
gataaagaatgtaccatcactgaagttgcaagagcaactgttgaggcatttgaaaatttt
gggcgagacgataataactcttttgtgcatctttaccaaaatgaagcaggaaaagctcta
tcaatttttttgcatgaattggtgagcgatcaatcaggattaaagtttcatctttatgaa
tggcctgctatgttttcagctcttatagcaacccgttgtgtaagcccctctcccggtggg
catccgcgtttatttatttgggggaccttagaatcacgcttgcaaacagtcgatacagtt
gttcttggtagccttaatgaaggattttggccttcaacaactcgcaatgatgctttttta
tcgcggccaatgaaaatgacactaactcttgaaccacctgaaaagcgtattggccttgca
gcacatgattttcaatgggccatgggaatgaataaagtggtgatgagccgagctacgcgg
gtcaaccatattccttctgttccctcacgctggttgcaacgtttagaaacagtagtaggc
aaacaagtttggaaaaaaatctgctcacggggagagacatttcttcattgggcaaaaatg
ctcgacaaaacagatacgattggttttacaccacgaccttgccctgtaccgccactcgat
atgcgcccacgtcatttttcagtgactgaaatagaaacattgcgctataatccttacgcc
atttatgctaaaaaaatcttgcgtctcaaaccacttaaggcactcatttatagtccctat
gcagctgaccgtggaattttatatcatgctattcttgccactttttgcacacaaataaaa
gacccaaacgttgctcatgcattagcgacatttctgtccattgggcgcaaagaatttgac
aaattaaatttgcctcctgacattaaagcaatttggtggtcaatttttgaaaattttgct
cctttctttattaaatgggaacaaaatctcggacctcgtaaacgacatgttgaagtcgct
gctcaaaaaacgcctataggcacaacaggtgtcactctttcagggcgtgctgatcgtatt
gatattttacctgataaaatggttgaaattcttgattttaaaaccaatactcctccttca
tctaaacaggttcgtgctttattacatccacaattggcgttggaagcagctttgttaatg
caaggagcttttacagacttccaagatcttactccttcaaacttattttacgtccccctt
aaaggaaaaggtccaatcaaatctaaatcgattatttcataccaaaaaaaagcaaaagat
cagacaagtgcagtcttacttggtcaagaagcatggaaacgtcttattacattaattgag
tattatcaaaatccacaacaaggttacctttcacacgcactcccttcacctcatcgttat
gaaggtgattatgaccacttggctcgattatcggaatggtctagtaatttttataaagca
ggttcatcatga
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