Blastococcus saxobsidens: BLASA_0011
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Entry
BLASA_0011 CDS
T01752
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bsd
Blastococcus saxobsidens
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsd03032
]
BLASA_0011 (gyrB)
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_0011 (gyrB)
Enzymes [BR:
bsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BLASA_0011 (gyrB)
DNA replication proteins [BR:
bsd03032
]
Prokaryotic type
DNA Topoisomerases
BLASA_0011 (gyrB)
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BLASA_0011 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
CCG01018
UniProt:
H6RJA5
LinkDB
All DBs
Position
13388..15421
Genome browser
AA seq
677 aa
AA seq
DB search
MVAAPQIENAYSGSSITVLEGLEAVRKRPGMYIGSTGERGLHHMVWEVVDNSVDEALAGH
ADRVHVTLLADGGVRVEDNGRGIPVDMHPVEKRPTVEVIMTVLHAGGKFDGKSYGVSGGL
HGVGVTVVNALSTRLDVNVWRDGTEWKQSYAYAKPGPLEEVGPTRKRGTAITFWADGDIF
ETTHYSFDTINRRLQEMAFLNKGLTITLRDERPGHSKVESGMADEVTLAEAAPQAGAEGE
AFEPTEVTYRYDAGLIDYVAHINAKKSPIHKSVVSFSAEGTGKNDMAMSIDVAMQWSEAY
SESVYTFANIINTHEGGTHEEGFRAALTSIVNRYAEEKKLFKGKDEKLTGEDIREGLAAI
VSVKIGDPQFEGQTKTKLGNTEVKGFVQRVCNEQIGHWFEANPTEAKMIINKAASAARAR
RAAQDARKLARKSLLSNNSLPGKLADCRSTDPRSSEIYIVEGDSAGGSAKSGRDSMFQAI
LPIRGKIINVEKARIDRVLKNNEVQSMITAFGTGIHDEFDLSKLRYHKIILMADADVDGQ
HIRTLLLTLLFRFMRPLVEAGHVYLAQPPLYKIKWGGKHADDYVYTDREKDAVLRTAAES
GRKVKDDAIQRFKGLGEMNAKELWETTMDPETRILLQVTLEDAATADQLFSVLMGEDVEA
RRSFITRNAKDVRFLDV
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgcagcaccccagatcgagaacgcgtactccggcagctccatcaccgtcctcgaa
gggctggaggcggtccggaagcgccccggtatgtacatcgggtcgaccggcgagcgcggg
ctgcaccacatggtgtgggaggtcgtggacaactccgtcgacgaggcgctggcgggtcac
gcggaccgggtccacgtcaccctgctggccgacggcggcgtccgggtcgaggacaacggc
cgtggcatcccggtcgacatgcacccggtcgagaagcggcccaccgtcgaggtgatcatg
accgtcctgcacgcgggcgggaagttcgacggcaagagctacggcgtctccggtggcctg
cacggcgtcggtgtgaccgtcgtcaacgccctctccacgcggctcgacgtcaacgtctgg
cgcgacgggaccgagtggaagcagagctacgcgtatgccaagccgggcccgctggaggag
gtcggccccaccaggaagcgcggcaccgcgatcaccttctgggccgacggcgacatcttc
gagacgacgcactactcgttcgacaccatcaaccgccgcctgcaggagatggccttcctc
aacaagggcctgacgatcaccctgcgcgatgagcgaccggggcacagcaaggtcgagtcc
ggcatggccgacgaggtcaccctcgccgaggccgcaccgcaggccggtgccgagggcgag
gccttcgagccgaccgaggtcacctacaggtacgacgccggcctcatcgactacgtcgcg
cacatcaacgcgaagaagtcgccgatccacaagtcggtcgtcagcttctccgccgagggc
accggcaagaacgacatggccatgtcgatcgacgtcgccatgcagtggtccgaggcctac
tcggagtcggtctacaccttcgcgaacatcatcaacacccacgaggggggcacgcacgag
gagggcttccgtgcggcactgacctcgatcgtcaaccggtacgccgaggagaagaagctc
ttcaagggcaaggacgagaagctcacgggtgaggacatccgcgagggactcgccgcgatc
gtctcggtgaagatcggcgacccgcagttcgaggggcagacgaagaccaagctcggcaac
accgaggtgaagggcttcgtgcagagggtctgcaacgagcagatcgggcactggttcgag
gccaaccccaccgaggccaagatgatcatcaacaaggccgcgtcggccgcccgcgcccgg
cgcgcggcgcaggacgcccgcaagctggcccgcaagagcctgctgagcaacaactcgctg
ccgggcaagctggccgactgccgctccaccgacccgcggtcctcggagatctacatcgtc
gagggtgactcggccggcggttcggccaagtccggccgcgactcgatgttccaggcgatc
ctcccgatccgcgggaagatcatcaacgtcgagaaggcgcgcatcgaccgggtcctcaag
aacaacgaggtccagtcgatgatcaccgcgttcggcaccggcatccacgacgagttcgac
ctgtccaagctgcgctaccacaagatcatcctgatggcggatgccgacgtcgacggccag
cacatccgcaccctgctgctgaccctgctgttccgcttcatgcggccgctggtcgaggcc
gggcacgtctacctcgcccagcccccgctgtacaagatcaagtggggcggcaagcacgcc
gacgactacgtctacacggaccgcgagaaggacgccgtgctccgcacggcggccgagtcg
gggcggaaggtcaaggacgacgcgatccagcggttcaagggcctcggcgagatgaacgcc
aaggagctgtgggagaccacgatggaccccgagacgcgcatcctgctgcaggtcaccctc
gaggacgccgccaccgcggaccagctgttcagcgtgctcatgggtgaggacgtcgaggcc
cgccgcagcttcatcacccgcaacgccaaggacgtccggttcctcgacgtctga
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