Blastococcus saxobsidens: BLASA_0021
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Entry
BLASA_0021 CDS
T01752
Name
(GenBank) putative DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03420
Nucleotide excision repair
bsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLASA_0021
03430 Mismatch repair
BLASA_0021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_0021
Enzymes [BR:
bsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLASA_0021
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLASA_0021
MMR (mismatch excision repair)
Other MMR factors
BLASA_0021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_22
AAA_30
AAA_11
AAA_12
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CCG01027
UniProt:
H6RJB4
LinkDB
All DBs
Position
27049..28806
Genome browser
AA seq
585 aa
AA seq
DB search
MTSLRQAISELQTNPEQWEAFQHDGHCVVLAPPGSGKTKLLTTKAVWLANNAIAPGRGLA
CITLTNPAAAELRTRVRRLGQPVGRTVNIGTVHSFAWSNVIRPFANAAGFPEWSRYTLAP
RQEANAAMREAIRRVFEPNEDTRYVNSTIMRNRKLCLTEQEWKTAGPNIREAALEYDRLL
REKDYVDFDTVVAMAVHLVEEYPFVRTVLHARFPYLMVDEYQDLAPGLHRIVTSLSLDEG
NSTLFAVGDPDQAIYGWTGTRPELLVELADLEAVHRVDLRINYRCGAVIAEAGRRILGAH
GAEAVTMRGGGSVSARCEPAGLTAQAAYIAGRIFELQSEGVSLHEIAVLAPTNGDCDELV
AVLRSRDIPVSWRADAYSPSPLTMTLEAFAAWVSHGREDSGYRLGDLLDQWQQLGDWSAL
RAGADRVVAALLAAAADTRAGEFVETIVTVLDSAGARAELRSDDANELERMRDALSPAGG
MADYTVRDLGGLRLRGGRVEVLTMSSSKGLEFDHVFIAALEEGKLPFFASVRGSAEWTED
RRKFYVSFTRARDSVEVLYSGWYDTPRGRRHNGPSVFLRESGLVG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcctgcggcaggcgatctccgagctgcagacaaacccagagcagtgggaggcg
tttcagcacgacgggcactgcgtcgtcctcgccccgcccggtagcggcaagacgaagctg
ctcaccacgaaggctgtctggctggcaaacaacgcaatcgcgccgggccggggcctggcc
tgcatcacgctgacgaacccggccgcggccgaactccggacccgagtccggcgcctcggc
caaccggtgggacgcacggtcaacatcgggacggtccactcgttcgcctggtcgaacgtc
atccggccatttgccaacgccgctggtttccccgaatggtcgcggtacaccctcgcgccg
cggcaggaggccaacgctgccatgcgggaggcgatccgccgagtgttcgagccgaacgag
gacacccgctacgtgaactcgacgatcatgcgcaaccgaaagctgtgcctgaccgagcag
gaatggaagacggccggcccgaacatccgcgaggccgccctcgaatacgaccggctgctg
cgggagaaggactacgtcgacttcgacactgtcgtcgccatggcggtccacctcgtcgag
gagtacccgttcgttcgcacagtgctccacgcccgtttcccgtacctgatggtcgacgag
taccaggacctcgccccggggttgcaccgcatcgtcacgtcgctgtcgctcgacgagggc
aactcaacgctcttcgccgttggcgaccccgatcaggccatctacgggtggaccggtacc
cgcccggagctactcgtggagctcgccgacctcgaggccgtccaccgggtcgacctccgc
atcaactatcgatgcggggcggtcatcgcggaagcgggccgacgcatcctcggcgcccac
ggagctgaggccgtgacgatgcgcggcggcgggtcagtcagtgcgcgatgcgagcctgca
ggactgaccgcacaagctgcctacatcgccgggagaatctttgagctgcagtcggagggc
gtctcgctgcacgagatcgctgtgctcgctcccaccaacggcgactgcgacgaactcgtg
gctgtccttcgaagtcgcgacatcccggtttcctggcgagcagacgcctattcgccgagc
ccattgacgatgacgctcgaggcattcgccgcgtgggtgtctcatggccgcgaggacagc
ggctaccgactcggcgacctcctcgaccagtggcagcagctcggcgactggtcagcactg
cgggccggtgccgatagggtcgtcgccgcgctgctcgccgcggcggcggacacgcgtgct
ggcgagttcgtcgagacgatcgtgacggtgctggactctgcgggcgcccgggccgaactt
cgctcggacgacgcgaacgaactcgagcgcatgcgtgacgctctgagtccagccggcggg
atggccgactacacggtccgcgacctgggaggtctacgcctgcgaggtggacgagtggaa
gtgttgacgatgtcctcgagcaaggggctggagttcgaccacgtcttcatcgcagcgttg
gaagagggcaagctcccgttcttcgcgtccgtacgcgggtctgccgagtggaccgaggac
cgccgcaagttctacgtgtcgttcacccgcgcccgggattcggtcgaagttctctactcc
ggctggtacgacaccccacggggccggcggcacaacggcccgagcgtgttcctccgcgaa
tccggcttggtcggctag
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