Blastococcus saxobsidens: BLASA_0639
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Entry
BLASA_0639 CDS
T01752
Name
(GenBank) Putative DNA helicase, superfamily II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BLASA_0639
09124 Replication and repair
03420 Nucleotide excision repair
BLASA_0639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsd03021
]
BLASA_0639
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_0639
Enzymes [BR:
bsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLASA_0639
Transcription machinery [BR:
bsd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BLASA_0639
DNA repair and recombination proteins [BR:
bsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BLASA_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
CCG01595
UniProt:
H6RQR8
LinkDB
All DBs
Position
complement(617328..619013)
Genome browser
AA seq
561 aa
AA seq
DB search
MNDGPLIVQSDKTLLLEVDHPLSRDCRAAIAPFAELERSPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVRYSRYPVPHALLVDVADTMDRFGRLTLANHPVHGLVLTTTDRAVLEEVI
RSKRVAPMLGARIDADSIAVHAAERGRLKQALLKIGWPAEDLAGYVDGAAHPIELDQSGW
HLRDYQQEAVDGFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVSGRQWKRE
LIARTSLTEEEIGEYSGERKEIRPVTIATYQVITTRRKGEYRHLDLFDAQDWGLIVYDEV
HLLPAPIFRLTADLQSRRRLGLTATLVREDGREDDVFSLIGPKRYDAPWKDIESQGYIAP
AECVEVRVSLDDEERMTYAVAEPEERYRIAATAQSKLPVIRRVLERHPEEQKLVIGAYLD
QLEELGTALDAPVIQGSTTNKERERLFQAFRVGEIKTLVVSKVANFSIDLPEAAVAVQVS
GTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTLDSEYAAHRQRFLAEQGYAYTIVD
AADLAGPGEVNGPDWVDEPAD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgacggtccgctcatcgtccagtcggacaagaccctgctgctcgaggtcgaccac
ccgctgtcccgtgactgccgggcggcgatcgccccgttcgccgagctggagcgctcaccg
gagcacgtgcacacctaccgggtgacgccgctcgcgctgtggaacgcccgggccgccggc
cacgacgccgagcaggtcgtcgacgcgctggtgcggtactcgcgctacccggtcccgcac
gcgctgctggtcgacgtcgccgacacgatggaccggttcggccggctgacgctggcgaac
cacccggtgcacgggctggtgctcaccaccaccgaccgcgcggtgctggaggaggtcatc
cgctccaagcgcgtggccccgatgctcggtgcgcggatcgacgccgacagcatcgccgtg
cacgccgcggagcgcggccggctgaagcaggcgctgctgaagatcggctggccggccgag
gacctcgccggctacgtcgacggcgccgcgcacccgatcgagctcgaccagagcggctgg
cacctgcgcgactaccagcaggaggccgtcgacggcttctgggccggcggatccggcgtc
gtcgtcctgccgtgcggagccgggaagacgctggtcggcgcggcggcgatggccgaggcg
aaggccacgacgctcatcctggtgaccaacaccgtctccggccggcagtggaagcgcgag
ctgatcgcccgcacatcgctgaccgaggaggagatcggcgagtactccggggagcgcaag
gagatccgcccggtcaccatcgcgacctaccaggtgatcaccacccgccggaagggcgag
taccggcacctggacctcttcgacgcccaggactggggcctgatcgtctacgacgaggtg
cacctgctgcccgcaccgatcttccggctgacggccgacctgcagtcccgccgccggctg
ggcctcaccgccaccctggtccgcgaggacgggcgggaggacgacgtcttctccctcatc
ggcccgaagcggtacgacgcgccgtggaaggacatcgagtcgcagggctacatcgcaccg
gccgagtgcgtggaggtgcgggtctccctcgacgacgaggagcggatgacctacgccgtc
gccgagcccgaggagcggtaccggatcgcggcgaccgcgcagtcgaagctgccggtgatc
cgccgggtgctggagcggcaccccgaggagcagaagctcgtcatcggcgcctacctggac
cagctcgaggagctcggcaccgcgctggacgccccggtgatccagggctcgacgacgaac
aaggagcgcgagcgcctcttccaggcattccgagtcggggagatcaagaccctcgtcgtc
tccaaggtcgcgaacttctccatcgacctgcccgaggccgcggtcgccgtacaggtgtcg
gggacgttcggctcgcggcaggaggaggcgcagcggctcggccgggtgctgcggcccaag
gccgacgggcggcaggcgcacttctacacggtggtcagccgggacaccctcgacagcgag
tacgccgcccaccggcagcggttcctcgccgagcagggctacgcctacacgatcgtcgac
gccgccgacctggccggccccggtgaggtcaacggccccgactgggtggacgagcccgcc
gactga
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