Blastococcus saxobsidens: BLASA_0852
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Entry
BLASA_0852 CDS
T01752
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd02020
Two-component system
bsd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BLASA_0852
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BLASA_0852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsd03021
]
BLASA_0852
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bsd02035
]
BLASA_0852
Transcription machinery [BR:
bsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BLASA_0852
Bacterial motility proteins [BR:
bsd02035
]
Flagellar system
Flagellar assembly proteins
Stator
BLASA_0852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
DUF7620
KORA
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
CCG01804
UniProt:
H6RTE6
LinkDB
All DBs
Position
complement(828241..829203)
Genome browser
AA seq
320 aa
AA seq
DB search
MTPVRSLATERSLRDRSAHDRPLHERPQNGRVPNPVKGRSPREVDALVTEHLPLAAFAVN
AVASRISLPSHVSREDLLSCAHVALVEVARRFDPAAGASFATYALARLQGAVLDELRSGD
WASRSVRAAARRTDAAADALTISLGRPPTREELATSLGIARSELDHLQVDVHRAVMVSID
AEAGPDGTSLDLPDTGESPERAVLRGERARHLHEAIRALPDRLDEVIERNFFGDESLTDI
AEDLGVTLSRVSQMRARALTLLHAAMSEVWDGRAVAPDGGVRARNQQLAYVARVAGRNGT
PAAQQRTAWSTAPDGAARTA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccagtccgttccctcgcgaccgagcgttccctgcgtgaccggtccgcgcacgac
cggccgctgcacgaacgaccccagaacggccgggtgcccaacccggtcaagggccggtcc
ccgcgggaggtggatgcgctcgtgaccgagcacctcccgctcgccgccttcgccgtcaac
gcggtggcctcccgcatctcgctgcccagccacgtcagccgcgaggacctgctgtcctgc
gcgcacgtggccctcgtcgaggtcgcccgccggttcgatccggctgcgggggcatcgttc
gcgacctacgccctggcccgcctccagggagccgtgctcgacgagctgcgctccggggac
tgggccagccgatcggtgcgggccgcggcccggcgcaccgacgccgccgccgacgcgctc
accatcagcctgggccggccgcccacccgggaagagctggccaccagcctcggcatcgcc
cgcagcgagctcgaccacctccaggtggacgtccaccgcgcggtgatggtcagcatcgac
gcggaggccggacccgacggcacctccctcgacctcccggacaccggcgaatcccccgaa
cgcgcggtgctgcgcggcgagcgcgcccggcacctgcacgaggccatccgtgcgctgccc
gaccggctggacgaggtcatcgagcgcaatttcttcggtgatgaatccctgaccgacatc
gcggaggacctcggggtcaccctctcccgcgtctcgcagatgcgggcgcgggccctgact
ctcctgcacgcggcgatgagcgaggtgtgggacggccgggccgtcgcaccggacggtggc
gtccgtgcgcgcaaccagcagctggcctacgtcgcccgggtggccggccgcaacgggaca
ccggccgctcagcagcgcaccgcctggtcgaccgcacccgacggcgccgccaggaccgcc
tga
DBGET
integrated database retrieval system
