Blastococcus saxobsidens: BLASA_1488
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Entry
BLASA_1488 CDS
T01752
Name
(GenBank) Conserved protein of unknown function; putative Peptidoglycan-binding LysM domain
Organism
bsd
Blastococcus saxobsidens
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
TPR_19
Motif
Other DBs
NCBI-ProteinID:
CCG02419
UniProt:
H6RKK0
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All DBs
Position
1414870..1418106
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AA seq
1078 aa
AA seq
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MTTPPRAFDVLRQLLALLALAAAVAGVPIALWQLGGAYLPDELPSWARVTTALSGPDTGA
VFLGLLVVIGWCAWACFALSVAVELVSQLRGLSPLRLPGLAVPQQLAGLLVAAVLGVASA
PLLAAPAVAGPPVVAEQPVDLEKPPPAPAPPADNPPTAPPAAGPTYSVQPRDTLGRIAAR
YLGDWTRFEEILELNRGRPQPDGAILSDPGLIRPGWVLVLPPDASLPVVDRTAGEVTVGP
GDTLTDIAEQHGLDGWQPIYALNAGEPLPGGGRFTDPDLILPGQVLDLPPVDPAAAGSFS
PATPEPPAEEAPPPPPPHEDEPAVPAEPSSTPTASPTSQSPAEEPVQSAADADALDADGD
QFPAELAAVLAGSGALLAAGVGATWLAHRRQRLRRRRPGRRLIPLPKGLSATQTVVTSAA
DAGTADYDALDLALRGLAVRISEHPDGLLPDVVAARLHGGRLELRLHAPADSPPPEPWTA
DDTGLWWFVRLDRDTGVATEVARARLAPYPTLVTIGTDGGDRWLLDLERLGAVYVTGPVD
RRTDFARHLAAEMAVNSWSDHLTVTTVGFGEELLDLAPHRVHPTETANDPDLHAALREAA
ERDTDDVLDGRLRAGAGDGWMPQVILNPRSPDQVGELAEASAALRARERRAAVALVLGVE
PGEAGDEWLLTLTDDGSLFIPALGLRLPAPRLTAEQARDIATLLAFERDSDDDPIPVAAG
DRPWQVHTDAAGAIRNNASDPGTTAPPVQLPATQTALRRSTTAAARDATPPAATEPSARP
TSSSSDAAETPERTAPADVRSRIEDDLAQLDRDLVDWWAPDCPRPRLTLLGPISLRALGD
EAAVARSGLRRRYEETVAYLATRPHGATADEAATALQPARGGRADPVSARAYVHRVAAGA
RAWLGTDPATGQKHLSSGHRGRYTLTGVLVDADLFRQLRARAAVRGHDLPDLLTALRLVS
GPPFAQRPAGYEWLDGLDLTFTAAVCDVAHQVVTAALVDGDLAAAGTASATALLVAPDDE
RVLLDAMWVAYHQGNRAEAETYVARIVAVHDGEDEMDLPMSTAETINRARRQFLDRAS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccaccgcgggcattcgacgtgctgcgccagctgctcgcccttctggcgctt
gcggccgccgtcgccggcgtccccattgcgctatggcagctcggtggcgcttacctgccc
gacgagctgccctcctgggctcgggtgaccactgcgctgagcggaccggacaccggcgcc
gtcttcctcggactgctcgtggtgatcggctggtgtgcctgggcgtgcttcgccctgtcg
gtggccgtcgagctcgtcagtcagctgcgcggcctgtcaccgctgcggctgcccggcctg
gcggtcccacagcagctcgccggcctgctggtggccgccgtcctcggtgtcgccagcgca
ccgctgttggccgctccggccgtggccggtccgccggtcgtcgccgaacagccggttgac
ctcgagaagccgccgccggcgcccgccccgccagccgacaatccgcctaccgcacctccc
gcggccggtccgacctactcggtgcagccgcgcgacactctcggccgcatcgccgcccgc
tacctgggcgactggacccggttcgaggaaatcctcgagctcaaccgcggccggccccag
cccgacggcgcgatcctctccgatccggggctgatccgtccgggctgggtattggtcctt
ccgcccgacgccagcctccccgtggtcgacaggacggccggcgaggtgaccgtggggccc
ggcgacaccctcaccgacatcgccgagcaacacggcctggacggctggcagccgatctac
gccctcaatgccggcgaaccccttcccggcggcggccgattcaccgatcccgacctgatc
ctccccgggcaggtcctcgacctcccgcccgtagacccggcagccgctggctctttttcg
cccgccacccccgaaccaccggctgaggaggcaccgccgccacccccgccgcatgaggac
gagccagccgtgccggcggagccctcatcgaccccgaccgcctcgccgacatcgcagagt
ccagccgaggaaccggtgcagtcggcagccgacgctgatgccctcgatgccgacggggac
cagttcccggcggagctggcggccgttctcgccggcagcggggcactgctcgccgcaggc
gtgggcgcgacgtggctggcgcaccgccgccagcggctgcgccgccgccgccctggccga
cggctgattcccctcccgaaggggctgtcggccacccagacggtcgtcacctcggcggcc
gacgcgggtacggccgactacgacgcgctcgacctggcgctgcgcggactcgccgtccgg
atctccgagcacccagacgggctgctgcccgacgttgtcgccgcccgactgcacggcggc
cggctcgagctgcggctgcacgccccggccgacagtccgccgcccgaaccgtggaccgcc
gatgacaccggcctgtggtggttcgtgcggctggaccgggacaccggcgtggccaccgaa
gtggcccgggctcgcctggcgccatatccgaccctggtcaccatcgggaccgacggcggc
gaccgttggctgttggaccttgaacgcctcggcgccgtgtacgtgaccggaccggtcgac
cgccgcacggacttcgcccggcacctggccgccgagatggccgtcaacagctggtcggac
cacctcaccgtcaccaccgtcggtttcggcgaggaactgctcgacctggcaccgcaccgg
gtccacccgaccgaaaccgccaacgaccccgacctgcacgccgcgctgcgggaagcggcc
gagcgcgacaccgacgacgtgctggacgggcggctgcgggccggagcgggggacggctgg
atgccgcaggtcatcctcaacccacgctcgccggatcaggtcggcgaactggccgaggcc
tccgctgctctgcgcgctcgcgagcggcgagccgcggtcgcactcgtgctcggcgtcgag
ccgggggaggccggcgacgagtggctgctgacgctgaccgacgacgggtcgctgttcatt
ccggcactggggctgcggctaccggctccacggctgaccgccgagcaggctcgcgacatc
gccacgctgctggccttcgaacgtgactccgatgacgacccgatccccgtcgccgccggc
gaccgcccctggcaggtgcacaccgacgccgccggcgcgatccgcaacaacgcatccgat
ccgggcaccaccgcgccaccggtccaactccccgccacgcagacggcgctacgccggtcc
accaccgccgcggcacgcgacgcgacgccgcccgccgcgaccgaaccttccgcccgaccg
acgtcgtcgtcgagcgatgccgccgagacgccggagcgtacggcgccggccgacgtgcgc
agccggatcgaggacgacctcgcccagctcgaccgtgatctcgtcgactggtgggcgccg
gactgcccccggccgcggctgacgctgctcggaccgatctccctgcgcgcgctcggtgat
gaggcggccgtggccaggtccgggctgcggcgccgctacgaggagacagtcgcctacctc
gccacccgcccgcacggcgccaccgccgacgaggccgccaccgcgctgcagcctgcccgc
ggcggcagggccgacccggtcagcgcccgcgcctacgtccaccgggtcgccgccggcgcc
cgcgcctggttgggcaccgaccccgccaccggccaaaagcacctcagctccggccaccgc
ggccgctacacgttgaccggcgtgcttgtcgacgccgacctcttccgccagttgcgcgcc
cgggccgctgtccgcggacacgacctgcccgacctgctgaccgcccttcggctggtgtct
ggcccgccgttcgcccagcgcccggccggctacgagtggctggacggattggacctcaca
ttcaccgccgcggtctgcgacgtcgcccaccaggtcgtcaccgccgccctcgtcgacggc
gacctggcggccgccggcaccgcctcggccaccgccctgctcgtggcgccggacgacgag
cgagtgctgctggacgcgatgtgggtggcctaccaccagggcaaccgcgccgaggccgag
acctacgtcgctcgcatcgtggccgtccacgacggggaggacgagatggacttgcccatg
agcaccgcggagaccattaaccgcgcccgccggcagttcctcgaccgagcctcgtga
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