Blastococcus saxobsidens: BLASA_3104
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Entry
BLASA_3104 CDS
T01752
Name
(GenBank) Topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsd
Blastococcus saxobsidens
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsd03032
]
BLASA_3104
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_3104
Enzymes [BR:
bsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BLASA_3104
DNA replication proteins [BR:
bsd03032
]
Prokaryotic type
DNA Topoisomerases
BLASA_3104
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BLASA_3104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CCG03973
UniProt:
H6RPB4
LinkDB
All DBs
Position
complement(2970035..2971021)
Genome browser
AA seq
328 aa
AA seq
DB search
MHGPGYRRRRAGRGFAYYDTDGALLKDDRLDRIRELAIPPAWKDVWICPWPNGHIQATGV
DAAGRRQYRYHDAWRARRDAEKHERVLEIAQQLPDVRDAVVAALRTRGLNRERVLAAAVR
LLDLGAFRVGSEQYVEENGTYGLATLERAHVSVRGERTFYSYTAKGGIEREVEITDRPTA
TVVRQLLERPAGVGEELLAYQTDDGEWHDVTSAEINSYLKEISGAEITAKDFRTWNATVM
MAATLAEVPPPATKTARKKVISAAYKAVSEQLGNTPAVCRASYVDPRVVDRFEHGETVAQ
ALQAADDAEADRDTQKVLEQVVCQLLSA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgcacggccccgggtaccgacgccggcgggccgggcgcggtttcgcctactacgacacc
gacggcgcgctcctcaaggacgaccgtctcgaccggatccgggagctggccatcccgccg
gcctggaaggatgtctggatctgcccctggcccaacggccacatccaggccacgggggtc
gacgccgccggacggcggcagtaccggtaccacgacgcctggcgcgcccggcgcgacgcg
gagaagcacgagcgggtcctggagatcgcccagcagctgcccgacgtccgcgacgcggtg
gtcgctgccctgcggacgcgtgggctcaaccgggagcgggtgctggccgcggcggtccgg
ctgctcgacctcggcgccttccgggtgggcagcgagcagtacgtggaggagaacgggacc
tacgggctggcgacccttgaacgggcgcacgtctcggtccgtggcgagcggaccttctac
tcctacaccgcgaagggcggcatcgagcgcgaggtcgagatcaccgaccggcccacggcc
accgtggtccgccaactgctggagcgcccggccggagtcggggaggagctgctcgcgtac
cagaccgacgacggcgagtggcacgatgtgaccagcgccgagatcaactcctacctcaag
gagatcagcggcgcagagatcacggccaaggacttccgcacctggaacgccacggtgatg
atggccgccaccttggccgaggtgccgccgccggcgacgaagacggcgcgcaagaaggtc
atcagcgcggcgtacaaggccgtgtcggagcagctgggcaacacgccggcggtctgcagg
gccagctacgtcgacccgcgcgtggtcgaccggttcgagcacggtgagaccgtggcgcag
gcgctgcaggcggccgacgacgcggaagccgaccgggacacccagaaggtgctcgagcag
gtggtctgccagctgctgtcggcctga
DBGET
integrated database retrieval system
