Blastococcus saxobsidens: BLASA_3254
Help
Entry
BLASA_3254 CDS
T01752
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLASA_3254 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_3254 (uvrB)
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLASA_3254 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BLASA_3254 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_16
AAA_22
AAA_5
DUF87
AAA_30
Helicase_RecD
DUF4941
nSTAND3
AIG1
AAA_7
DUF6716
Motif
Other DBs
NCBI-ProteinID:
CCG04122
UniProt:
H6RR42
LinkDB
All DBs
Position
complement(3127468..3129582)
Genome browser
AA seq
704 aa
AA seq
DB search
MRTTTDLRPTQGHFRVVSEFQPAGDQPAAIKALAERVDAGEQDVVLLGATGTGKSATTAW
LIEQVQRPTLVMAPNKTLAAQLANEFRELLPDAAVEYFVSYYDYYQPEAYVPQTDTYIEK
DSSVNEEVERLRHSATNSLLTRRDVVVVSTVSCIYGLGTPEEYVERALRISVGEDRDRDE
LLRTLVTEQYTRNDLSFTRGTFRVRGDTIEVFPVYEELAVRIEMFGDEVERLYYLHPLTG
EVVREVEELFVFPASHYVAGPDRMERAIRGIEAELEQRLAELDRQGKLLEAQRLRMRTTY
DIEMMRQVGFCSGIENYSRHIDGRAPGSAGACLIDYFPDDFLLVIDESHVTVPQIGGMYE
GDMSRKRTLVEHGFRLPSAMDNRPLRWEEFTDRIKQTVYLSATPGDYELGRTGGEVVEQV
IRPTGLIDPEVVVKPTKGQIDDLVHEIRLRTEKDERVLVTTLTKKMAEDLTDYLLELGIK
VRYLHSEVDTLRRVELLRELRQGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSG
KSLIQTIGRAARNVSGQVHMYADKITPSMAQAIEETNRRREKQMAYNKERGVDPQPLRKK
IVDILEGIYREAEDSESTELIGGSGRQQSRGKAPVPGLSSKSRAKAGAIDVQGLPRAELA
DMITTMNEQMLAAARELQFEVAARLRDELTELKKELRQFDAAHA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcacgaccaccgatctccggcccacccaggggcacttccgcgtcgtcagcgagttc
cagcccgccggcgaccagccggcggcgatcaaggccctcgccgagcgggtcgacgccggt
gagcaggacgtcgtcctgctcggcgccaccggcaccgggaagtcggcgacgacggcctgg
ctgatcgagcaggtgcagcgtccgacgctggtgatggcgccgaacaagaccctcgccgcc
cagctggccaacgagttccgcgagctgctgcccgatgcggcggtcgagtacttcgtctcg
tactacgactactaccagcccgaggcgtacgtcccgcagaccgacacctacatcgagaag
gactcctcggtcaacgaggaggtcgagcggctgcggcactcggccacgaacagcctgctc
acccgccgcgacgtggtggtggtgtccaccgtctcctgcatctacggcctgggcacgccg
gaggagtacgtcgagcgggcgctgcggatctcggtgggggaggaccgcgaccgcgacgag
ctgctgcgcaccctggtcaccgagcagtacacgcgcaacgacctgtcgttcacccggggc
accttccgggtgcgcggcgacaccatcgaggtcttcccggtctacgaggagctcgccgtc
cggatcgagatgttcggcgacgaggtggagcggctctactacctgcacccgctgacgggg
gaggtcgtccgggaggtcgaggagctgttcgtgttcccggccagccactacgtcgccggg
cccgaccgcatggagcgggcgatccgtggcatcgaggccgagctggagcagcggctggcc
gagctggacaggcagggcaaactgctggaggcccagcggctgcgcatgcgcaccacctat
gacatcgagatgatgcgccaggtcggcttctgctccggcatcgagaactactcgcggcac
atcgacggccgtgcacccggcagcgccggcgcatgtctcatcgactacttccccgacgac
ttcctcctcgtcatcgacgagtcgcacgtgaccgtgccgcagatcggcggcatgtacgag
ggcgacatgagccgcaagcggacgctggtcgagcacggcttccggctgccctcggcgatg
gacaaccgcccgctgcgctgggaggagttcaccgaccggatcaagcagacggtctacctg
tccgccacgcccggggactacgagctgggccgtaccggcggggaggtcgtcgaacaggtc
atccggcccaccggactgatcgacccggaggtggtcgtcaagccgaccaagggccagatc
gacgacctggtgcacgagatccggctgcgcaccgagaaggacgagcgggtcctggtcacc
acgctcaccaagaagatggccgaggacctcaccgactacctgctcgagctcggcatcaag
gtgcgctacctgcactcggaggtggacacgctgcgccgggtggagctgctgcgggagctg
cggcagggcgagtacgacgtgctcgtcggcatcaacctgctgcgcgaggggctggacctc
ccggaggtctccctggtggccatcctcgacgccgacaaggagggcttcctccggtcgggc
aaatcgctgatccagaccatcggccgggccgcgcggaacgtgtccggccaggtgcacatg
tacgccgacaagatcaccccgtcgatggcgcaggcgatcgaggagacgaatcggcggcgc
gagaagcagatggcctacaacaaggagcgcggcgtcgacccgcagccgctgcggaagaag
atcgtggacatcctggaaggcatctaccgcgaggcggaggactcggagtccaccgagctg
atcggcggctccggccggcagcagtcccgcggcaaggcgccggtgccgggcctgtcgtcg
aagagcagggccaaggccggggcgatcgacgtgcagggcctcccgcgggccgagctggcc
gacatgatcacgaccatgaacgagcagatgctcgccgccgcccgcgagctgcagttcgag
gtggccgcccggctccgcgacgagctcaccgaactgaagaaggagctccgccagttcgac
gccgcccacgcctga
DBGET
integrated database retrieval system
