Blastococcus saxobsidens: BLASA_3278
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Entry
BLASA_3278 CDS
T01752
Name
(GenBank) Ribonuclease D (modular protein)
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bsd
Blastococcus saxobsidens
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsd03016
]
BLASA_3278
Enzymes [BR:
bsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BLASA_3278
Transfer RNA biogenesis [BR:
bsd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BLASA_3278
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
CCG04146
UniProt:
H6RR66
LinkDB
All DBs
Position
3151765..3153096
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AA seq
443 aa
AA seq
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MLLVPGSAGCVTADRGRARGPTDENRQEGGRQLSTEPTPQPPDDVPEAIPLLAPRDGLPP
VIETSTQLVEYAAALRAGTGPVAVDAERASGYRYGQKAYLVQLRRNGSGTGLVDPVPLPD
LSVIQQAIADTEWVLHAANQDLPCLAEIGLVPARIFDTELAARLAGLPRVGLGAVVESLL
GYSLQKGHSAADWSTRPLPEEWLVYAALDVEVLVDLRDALAAILGEQGKTEWARQEFEAI
LAAGPPAPKQDPWRRTSGVHGLRSRRQLGMLRAIWEARDDLARRRDIAPGRVLPDSAMVA
AVQADPKNEGALLELPVFRGRANRRMVAHWFTALARGKAQPDDELPLHSKPGDGPPPVNR
WADRDPAAAARLQVARAGLAELSEKHAVPVENIVSPDLVRRIMWSPPRPRDAAAVTDALR
DGGAREWQIELTLDVLTDAIGRD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgctcctcgtcccgggatccgcaggctgcgtcacggcggaccgcggccgagcgcgtgga
ccgacagacgagaaccggcaagaaggtggacggcaactgagcaccgagcccactccccag
ccgccggacgacgtacccgaggcgatcccgctgctcgccccccgggacgggcttccgccg
gtcatcgagacctccacccagctggtggagtacgccgcggcgctccgcgcgggcaccggc
ccggtcgccgtcgacgccgaacgcgcctccggctaccgctacggccagaaggcctacctg
gtgcagctgcgccgcaacggctccggcaccggcctggtcgaccccgtcccgctccccgac
ctgtcggtcatccagcaggccatcgccgacaccgagtgggtcctgcacgccgccaaccag
gacctgccgtgcctggccgagatcggcctggtgcccgcgcgcatcttcgacaccgagctc
gccgcccggctggccggactgccccgcgtgggcctcggcgccgtcgtcgagtcgctgctc
gggtactcgctgcagaaggggcactcggctgccgactggagcacccggcccctgcccgag
gagtggctggtctacgccgctctggacgtcgaggtactggtcgacctgcgggacgcgctg
gccgcgatcctcggggagcagggcaagaccgagtgggcccggcaggagttcgaggcgatc
ctggccgccggtccgccggcgcccaagcaggacccgtggcggcggacctccggcgtccac
gggctgcgcagccgccgtcagctgggcatgctgcgagccatctgggaggcgcgcgacgac
ctcgcccggcgccgcgacatcgcccccggtcgggtgctgcccgactcggcgatggtcgcg
gccgtgcaggccgacccgaagaacgagggcgccctgctggagctgccggtcttccgtggc
cgggccaaccggcgcatggtggcgcactggttcaccgcgctcgcgcgtggcaaggcacag
cccgacgacgagctgccgctgcacagcaagcccggcgacggtccgccgccggtgaaccgc
tgggccgaccgcgatccggcggccgccgcccgcctgcaggtggcccgcgccgggctcgcc
gagctgtcggagaagcacgccgtgccggtcgagaacatcgtctcccccgacctggtgcgc
cggatcatgtggagcccaccccggccccgcgatgccgcggcggtcaccgacgcgttgcgc
gacggcggcgcccgggagtggcagatcgagctcaccctcgacgtcctgaccgacgcgatc
ggccgcgactga
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