Blastococcus saxobsidens: BLASA_3490
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Entry
BLASA_3490 CDS
T01752
Name
(GenBank) Putative exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03030
DNA replication
bsd03430
Mismatch repair
bsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLASA_3490
03430 Mismatch repair
BLASA_3490
03440 Homologous recombination
BLASA_3490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsd03032
]
BLASA_3490
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_3490
Enzymes [BR:
bsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLASA_3490
DNA replication proteins [BR:
bsd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BLASA_3490
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BLASA_3490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
TerB
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
CAF1
Motif
Other DBs
NCBI-ProteinID:
CCG04352
UniProt:
H6RT49
LinkDB
All DBs
Position
complement(3346822..3348123)
Genome browser
AA seq
433 aa
AA seq
DB search
MTVAVVDVETTGLSPRTDRVVEIGVVLLDDRGEVEAEFETLVNPGRDVGPTGLHGISAGD
VVDAPAFADVAQHLRSLLVGRVLVAHNALFDLRFLAREFGRAGLPTALSPSLCTMRLAPL
FFGSGTRSLQALCGFLDIPLVHGHAALHDARATAELMLAMLASDLGGGSLAGAGVRVDFA
DDGSYRGFEALDGGWADLVAAATAYADGSTCPPCRTLPRDAATAAVRERDGYLAGLVASL
PALDDAPPSMAPYLTVLDQVLEDRLVSVTEADQLASLAGELGCGPDHVTAAHRIYLEALA
TAAYADGLVTEGERADLERVAALLGMRSKDVDLALSVVRSGAQVSLPRRAEVFSPGDRIV
FTGAMSRTRDELEQAARDAGLRPMSSVSKQTGVLVCADPHSQSGKASKARALGVRVISEA
VFWEALSVTGART
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgttgccgtcgtcgacgtggagaccaccggcctgtccccgcggaccgaccgggtc
gtggagatcggcgtcgtcctgctcgacgaccgcggcgaggtcgaggccgagttcgagacc
ctggtcaacccgggccgggacgtcggcccgaccgggctgcacggcatcagcgccggcgac
gtcgtcgacgcgccagccttcgccgacgtcgcacagcacctgcgctcgctgctcgtcggc
cgggtcctcgtcgcccacaacgcgctgttcgacctgcgcttcctcgcccgcgagttcggc
cgcgccgggctgccgaccgccttgtcgccgtcgctgtgcaccatgcgcctggcaccgctg
ttcttcgggtccggcacccggtcgctccaggcgctgtgcggcttcctcgacatcccgctc
gtgcacggccacgccgcgctgcacgacgcccgcgccaccgcggagctcatgctggccatg
ctcgcctccgacctcggtggcggatcgctggccggtgcgggtgtccgggtcgatttcgcc
gacgacggcagctaccgcggcttcgaggccctcgacggcggctgggccgacctggtcgcc
gccgcgaccgcgtacgcggacggcagcacgtgtccgccgtgccggacgctgccccgcgac
gccgcgaccgccgccgtccgcgaacgggacggctatctcgccggcctcgtcgcctccctg
ccggcgctggacgacgcgccgcccagcatggcgccgtacctgaccgtgctggaccaggtg
ctggaggaccggctggtcagcgtcaccgaggccgaccagctggcttcactcgccggcgag
ctcggctgcgggcccgaccacgtgacggccgcgcaccgcatctacctggaggcgctggcc
accgccgcgtacgccgacggtctcgtcaccgagggtgagcgcgctgacctcgagcgcgtg
gcggcgctgctcggcatgcgcagcaaggacgtcgacctggcgctgtcggtcgtccgcagc
ggcgcgcaggtctcgctgccccggcgggccgaggtgttctcgcccggtgaccggatcgtc
ttcaccggagccatgagccgcacccgcgacgaactcgagcaggccgcccgggacgccggc
ctgcggccgatgtcgtcggtgtcgaagcagaccggcgtcctcgtctgcgccgacccgcac
tcccagtcgggcaaggccagcaaggcgcgggcgctcggcgtccgggtgatcagcgaggcg
gtgttctgggaggcgctctcggtgaccggggcacgcacgtga
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