Blastococcus saxobsidens: BLASA_3738
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Entry
BLASA_3738 CDS
T01752
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bsd
Blastococcus saxobsidens
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsd03016
]
BLASA_3738 (truB)
Enzymes [BR:
bsd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BLASA_3738 (truB)
Transfer RNA biogenesis [BR:
bsd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BLASA_3738 (truB)
Prokaryotic type
BLASA_3738 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF2244
Motif
Other DBs
NCBI-ProteinID:
CCG04575
UniProt:
H6RVU5
LinkDB
All DBs
Position
complement(3601539..3602390)
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AA seq
283 aa
AA seq
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MTSHDVVAQARRALSVRKVGHAGTLDPMATGLLVLGVGTATRLLGYVGGHDKTYEATIRL
GQSTVTDDREGEVLSATAAAHLDDDAVRSALAAQTGPLQQVPSAVSAVKVDGRRSYDRVR
AGETVELAARSVTVHRLEVHRVTRPTPDLVDVDVTVDCTAGTYIRAIARDAGAALGVGGH
LTALRRTASGPFTVAQAGVVEDAAASLVAGGGAGFLPLTEAARVVFPERRLTTEEARALG
YGQRIPATGSGGLHAAVAPDGRLAALVEDAGSTARVTVGFPPP
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccacgacgtcgtggcccaggcgcggcgggcgctgtcggtccgcaaggtcggc
catgccgggacgctggatccgatggccaccggcctgctggtcctcggcgtcggtacggcc
acccggctgctcggctacgtcggcgggcacgacaagacctacgaggccaccatccggctg
ggccagtcgacggtcaccgacgaccgtgagggggaggtgctgagcgcgacggcggccgct
cacctggacgacgatgcggtccggtcggccctcgctgcgcagaccggccccctgcagcag
gtgccgtcggcggtcagcgcggtcaaggtggacggccgccgctcctacgaccgcgtgcgg
gcgggggagacggtcgagctggccgcccgctcggtcaccgtgcaccggctcgaggtgcac
cgggtcacccggccgaccccggacctggtggacgtcgacgtgacggtcgactgcaccgcc
ggcacctacatccgggccatcgcccgcgacgccggcgcggccctcggtgtcggcggccac
ctcaccgcgctgcgtcgcaccgcctccgggccgttcaccgtggcgcaggccggcgtggtg
gaggacgcggcggcctcgctcgtggccgggggcggggccggcttcctcccgctcaccgag
gccgcgcgggtggtcttccccgagcgccggctcaccaccgaggaggcccgggcgctcggc
tacggccagcggatcccggcgacggggtccgggggactgcacgccgccgtcgctcccgac
ggccggctggcggcgctggtggaggacgccggcagcactgcccgcgtgacggtgggtttc
ccgccgccctga
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