Blastococcus saxobsidens: BLASA_3808
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Entry
BLASA_3808 CDS
T01752
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BLASA_3808 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsd03019
]
BLASA_3808 (rnc)
03009 Ribosome biogenesis [BR:
bsd03009
]
BLASA_3808 (rnc)
03036 Chromosome and associated proteins [BR:
bsd03036
]
BLASA_3808 (rnc)
Enzymes [BR:
bsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BLASA_3808 (rnc)
Messenger RNA biogenesis [BR:
bsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BLASA_3808 (rnc)
Ribosome biogenesis [BR:
bsd03009
]
Eukaryotic type
90S particles
RNase
BLASA_3808 (rnc)
Prokaryotic type
rRNA processing factors
BLASA_3808 (rnc)
Chromosome and associated proteins [BR:
bsd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BLASA_3808 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CCG04643
UniProt:
H6RWM2
LinkDB
All DBs
Position
complement(3667062..3667847)
Genome browser
AA seq
261 aa
AA seq
DB search
MGTTAAATHPAESAAGGRAPDGAAHPGGEAHAARAAAWLDDALGVRLPDDLLGLMLTHRS
FAYENGGLPTNERLEFLGDSVLGLVVTDELYRSQPGLPEGQLAKLRASVVNMTSLARVAR
RLGDGGLGPHVLLGRGEETTGGREKDSILADALEALVGAIHLGCGLDTASAVVHRLFDPL
LVEAATRGAGLDWKTSLQELGAAQGLGAPTYQVDDEGPDHAKTFTAAVLLAGIVRGTGSG
RTKKAAEQEAAEIAWRALSEE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggggacgacggccgccgcgacgcaccctgccgagagtgcggcgggcggtcgcgccccg
gacggggcggcacaccccggcggcgaggcacacgccgcgcgggccgctgcgtggctcgac
gacgctctcggcgtccggctgcccgacgacctgctgggcctgatgctgacgcaccggtcg
ttcgcgtacgagaacggcggcctgccgaccaacgagcgcctggagttcctgggcgactcc
gtgctcggcctcgtcgtcaccgacgagctgtaccgcagccagccgggcctccccgagggc
cagctggcgaagctccgcgcgtcggtggtcaacatgacgtcgctggcgcgggtcgcccgc
cggctcggcgacggcggcctcggcccccacgtgctgctggggcgcggtgaggagacgacc
ggcggccgggagaaggactcgatcctcgccgacgccctcgaggcgctggtcggcgcgatc
cacctcggctgcgggctggacaccgcctccgcggtcgtgcaccggctgttcgacccgctg
ctggtcgaggccgccacccgcggcgccggcctggactggaagaccagcctgcaggagctc
ggtgccgcgcaggggttgggcgcgcccacctaccaggtggacgacgagggacccgaccac
gccaagaccttcaccgccgccgtgctgctcgccggcatcgtccggggcaccggcagcggc
cgcacgaagaaggccgccgagcaggaggcggccgagatcgcctggcgcgccctgtccgag
gagtag
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