Blastococcus saxobsidens: BLASA_3972
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Entry
BLASA_3972 CDS
T01752
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd00061
Fatty acid biosynthesis
bsd00071
Fatty acid degradation
bsd01100
Metabolic pathways
bsd01212
Fatty acid metabolism
bsd02024
Quorum sensing
bsd04146
Peroxisome
Module
bsd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BLASA_3972 (lcfB)
00071 Fatty acid degradation
BLASA_3972 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BLASA_3972 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BLASA_3972 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bsd01004
]
BLASA_3972 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bsd04147
]
BLASA_3972 (lcfB)
Enzymes [BR:
bsd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BLASA_3972 (lcfB)
Lipid biosynthesis proteins [BR:
bsd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BLASA_3972 (lcfB)
Exosome [BR:
bsd04147
]
Exosomal proteins
Exosomal proteins of breast milk
BLASA_3972 (lcfB)
Exosomal proteins of breast cancer cells
BLASA_3972 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
CCG04800
UniProt:
H6RJ55
LinkDB
All DBs
Position
3840430..3841932
Genome browser
AA seq
500 aa
AA seq
DB search
MTNLAQNLLDSAAERESRPALRMDDAVLTYGEFRDAALRVAAALQGRGVRPGDRVGLVLP
NVLAFPVVLYGALLAGAAVVPMNPLLKAREVQYYLEDSGARVVVTLGSTAEPVREAAGTV
GVEAVVVGPASPSELMADEPLAEPVERSDEDLAVILYTSGTTGQPKGAELTHANLGRNAV
TTADTLAENTPDDVIMGCLPLFHVFGLTCGLNTAVLRGSLLTLIPRFDGGKALEVIERDR
VTIFEGVPTMFAAMLHQPDADRHDVSSLRLCVSGGSAMPVEIMRSFEERFGCIILEGYGL
SETSPVASFNHPHAARKPGSIGTPIRGVEMRLVDDEGEDVGPGEVGEIAIRGENVMTGYW
QRDEETAKAIPDGWFRTGDLARKDDDGYFFIVDRKKEMIIRGGYNVYPREIEEALYEHPA
VAEVAVIGISHPDLGEEVAAAVALKPGAGAEVEELREFVKSRVAAYKYPRHLWLVDTLPK
GPTGKILRRSVEVPQEVGTR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacctcgcgcagaacctgctcgattcggccgccgagcgagagagccgccccgcc
ttgcggatggacgacgccgtgctgacctacggcgagttccgggacgccgcgctgcgggtc
gccgcggcactgcagggccgtggcgtgcgacccggtgaccgcgtgggcctggtgctgccc
aacgtgctggcgttcccggtcgtcctctacggcgccctgctcgccggggccgccgtcgtc
cccatgaacccgctgctcaaggcgcgggaggtgcagtactacctggaggactccggggca
cgggtcgtcgtcaccctcgggtccaccgccgagccggtgcgcgaggcggccggcacggtc
ggcgtcgaggccgtggtggtggggccggcgtccccgtccgagctgatggccgacgagccg
ctggccgagccggtcgagcggtccgacgaggacctcgcggtgatcctctacacctcgggc
acgaccgggcagccgaagggcgccgagctcacccacgccaacctgggccgcaacgccgtg
accacggccgacaccctcgccgagaacacccccgacgacgtgatcatgggctgcctgccg
ctgttccacgtcttcgggctgacctgcggcctcaacaccgccgtcctgcggggctcgctg
ctcacgctcatcccccggttcgacggcggcaaggcgctggaggtcatcgaacgcgaccgg
gtgaccatcttcgagggcgtcccgacgatgttcgcggcgatgctgcaccagcccgacgcc
gaccggcacgacgtgtcgagcctgcggctgtgcgtctccggcgggtcggccatgccggtg
gagatcatgcggtcgttcgaggagcggttcggctgcatcatcctcgagggctacggcctg
tcggagacctcgccggtcgcctccttcaaccacccgcacgccgcgcggaagccgggctcc
atcggcaccccgatccgcggcgtggagatgcgactggtcgacgacgagggcgaggacgtc
ggtccgggcgaggtcggcgagatcgccatccgcggcgagaacgtcatgacgggctactgg
cagcgcgacgaggagacggccaaggcgatccccgacggctggttccgcaccggcgacctg
gcccggaaggacgacgacggctacttcttcatcgtcgaccgcaagaaggagatgatcatc
cgcggcggctacaacgtgtacccgcgggagatcgaggaagccctctacgagcacccggcg
gtggccgaggtggcggtgatcggcatctcgcaccccgacctgggtgaagaggtggccgcg
gcggtcgcgctgaagccgggggccggcgccgaggtcgaggagctccgcgagttcgtcaag
tcgcgggtggccgcctacaagtacccgcggcacctgtggctggtggacaccctgcccaag
gggccgacggggaagatcctgcgacggtcggtggaggttccccaggaggtggggacccga
tga
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