Blastococcus saxobsidens: BLASA_4049
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Entry
BLASA_4049 CDS
T01752
Symbol
uvrD
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03420
Nucleotide excision repair
bsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLASA_4049 (uvrD)
03430 Mismatch repair
BLASA_4049 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_4049 (uvrD)
Enzymes [BR:
bsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLASA_4049 (uvrD)
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLASA_4049 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BLASA_4049 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CCG04877
UniProt:
H6RK21
LinkDB
All DBs
Position
complement(3913443..3915437)
Genome browser
AA seq
664 aa
AA seq
DB search
MVHADAEAVLAGLDDEQRAAAQAVSGPVCILAGAGTGKTRTITHRIAYGVHTGAYVPEQV
LAVTFTARAAGELRARLAALDVGGVQARTFHAAAMRQLRYFAPRVLGGPMPGLIENKLRV
VASAAARNRLTTDRTSLRDLAGEIEWAKTTLATPEDYPARAKAAGREAPFEPAAVAAVYE
SYESAKQRDGALDFEDLLLVTAYALEGHPDVARQVRAQYRYFVVDEYQDVNPLQQRLLDA
WLGGRAEVCVVGDPNQTIYSFTGADPDYLLGFADRYTDAAVVKLERDYRSTPQVVGLANR
LIGQAPKRKGLPGLRLLGQRAGGPEPTFVEHPDEPAEAAAVAARCKALIDDGTPAAEIAV
LFRINAQSQVYESALTDVGVPYVLKGGERFFERPEVREAVLLLRGAAAGGNEPGMLVPAV
RDVLASTGWVEHRPPPGGAARDRWQSLAALVDLAVDLVAENPSLDLAGFVTHLAERADAQ
HAPTVQGVTLASMHAAKGLEWDVVFVVGLVDGVLPIAQSLSRPEAVEEERRLLYVAVTRA
REQLTLSWSLARNPGGRRSRPRSRFLDGLAPGSGPTAPPARRPAKKQKVVLEGEAGELFE
RLRAWRSQAAQSASVPAYVVFTDATLQAIAESRPASLRELSGLPGIGARKLELYGEDVLA
AVSS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgcggacgcggaggccgtcctggccggcctcgacgacgagcagcgcgcggcg
gcgcaggcggtgtcgggcccggtctgcatcctcgccggtgccggcaccggcaagacccgc
acgatcacgcaccgcatcgcctacggcgtgcacaccggggcctacgtgcccgagcaggtg
ctcgcggtgacgttcacggcgcgtgccgcaggagagctgcgtgcccggctggccgctctc
gacgtcggcggggtgcaggcgcgcaccttccacgccgcggccatgcgccagctgcggtac
ttcgcgccgcgcgtgctcggtgggccgatgcccgggctgatcgagaacaagctgcgcgtg
gtcgcctccgcggcggcccgcaaccggctcaccaccgaccgcaccagcctgcgggacctc
gccggcgagatcgagtgggcgaagacgacgctggccacgcccgaggactacccggcccgg
gccaaggcggccgggcgggaggcgcccttcgagccggccgcggtcgcggcggtgtacgag
agctacgagtcggccaagcagcgcgacggggcactggacttcgaggacctgctgctggtc
accgcctacgcgctcgaggggcaccccgacgtcgcgcggcaggtgcgcgcgcagtaccgg
tacttcgtcgtcgacgagtaccaggacgtcaacccgttgcagcagcggctgctcgatgcc
tggctcggcggccgggccgaggtctgcgtcgtgggtgacccgaaccagacgatctactcg
ttcaccggggccgaccccgactacctgctcgggttcgccgaccgctataccgacgccgcc
gtggtcaagctggaacgcgactaccgctccacgccacaggtggtcggcctggcgaaccgg
ctgatcggtcaggcgcccaagcgcaaggggctcccggggctgcgcctgctcggccagcgg
gcgggaggcccggagccgacgttcgtggagcaccccgacgagccggccgaggccgcggcg
gtcgcggcgcggtgcaaggcgctgatcgacgacggcacccccgccgccgagatagcggtc
ctcttccgcatcaacgcgcagtcgcaggtgtacgagtcggcgctgaccgacgtcggggtg
ccctacgtcctcaagggcggcgagcggttcttcgagcgccccgaggtccgcgaggccgtc
ctgctgctgcgcggcgcggcggccggcggcaacgagcccggcatgctcgtgcccgccgtc
cgcgacgtgctcgcctcgaccggttgggtcgagcaccggccgccgcccggaggagcggcg
cgcgaccgctggcagtcgctggccgcactcgtcgacctcgccgtcgacctcgtggccgag
aacccgtcgctcgacctggccggcttcgtcacccacctggccgagcgggccgacgcccag
cacgcgcccaccgtccagggcgtcacgctcgcctcgatgcacgcggccaagggcctggag
tgggacgtcgtcttcgtcgtcggcctggtcgacggcgtgcttcccatcgcgcagtcgctg
agccgtccggaggcggtggaggaggaacgccggctgctgtacgtggccgtcacccgggcc
cgcgagcagctcaccctgtcgtggtccctggcccgcaatcccgggggccgccgttcccgg
ccgcgcagccggttcctcgacgggctggcgccgggctcgggtcccaccgccccgccggcc
cgccggccggcgaagaagcagaaggtcgtcctcgagggggaggccggcgagctgttcgaa
cggctccgggcctggcggagccaggccgcccagtcggcgtcggtcccggcctacgtcgtc
ttcaccgacgcgaccctgcaggccatcgccgagagccgcccggccagcctccgggagctg
tcggggctgcccggcatcggcgcccggaagctcgagctctacggcgaggacgtgctggcc
gccgtcagcagctga
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