Blastococcus saxobsidens: BLASA_4145
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Entry
BLASA_4145 CDS
T01752
Name
(GenBank) putative ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bsd
Blastococcus saxobsidens
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_4145
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BLASA_4145
Archaeal homologous recombinant proteins
BLASA_4145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
ABC_tran
AAA_21
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
CCG04972
UniProt:
H6RL05
LinkDB
All DBs
Position
complement(4008439..4011399)
Genome browser
AA seq
986 aa
AA seq
DB search
MRLHALSVTAFGPFAGTVEVDLDDVGRDGLFLLWGPTGAGKTTLLDAVVFALYGRVPGAR
GEEKRLRSDHADVGTRTEVSCELTLGGERLRVVRRPEQQRPKKRGEGWATEQAKLVVSRL
TDGGWEPVSTRIDEGSEHLRSRLGLDVHQFCQVVLLPQGDFARFLRAEPEHRAELLRTLF
DVDRFARAEDWLAEERAAARDRMAAQRARLSTLLARVAQSADVDVPEGLAPELVGAGPGA
GVLPWVQRVRASAGERLAEADARAAEAAAEVATTDAELAAARALLERYARRDQAARELTA
LEERGPALVPLRTERDAGRRAEPLRDVLQAAGAAALVAEQAADGLQAALRAWGPVSSGQE
ATTALARELRDRAAEARALLPEVERAAGLERSIAGLDRIIDELGQRCAAAEQAAAGFPAR
FAEQEERVAAARAAAAELPALRSALDMAEAALAAGRAAEALERQLAGFRDDVLGLRAAWA
DAREVWLDLRARRLDGMAAELAAGLADGADCPVCGATEHPRPATSGGERVTAADEDAAHV
AADARESALTAATARLDAAERELAGLRARAATLAPGEQAALVEDLTTRVRAAAGVAAVLR
SAEEQVQRLAGEREAVAARLAADREEVRARTAERDSLAAGLADLTQRLAVARAADPDLAT
RVARLSAVAAACEAVVAAHTDELRARVQRDTAQQVAEERAAAAGLDDVLTAVSALLPPGR
LARLDRELDEHDQRLALLRGRLAEPELADLPPRPDMGSLEDRCAGATRRREEAVAELQQA
RRCTASLAELVGRVTAAELELAEERDWADQVTALADLAHGRGANTRRMRLQSFVLAARLE
QVAEVASRRLLDMSGGRYTFLHSDTQGRHGARGGLGLDVFDEYTGVRRPTKTLSGGESFM
ASLALALGLADVVTAETGGVRIDTLFVDEGFGTLDAQALDAVMTVLDDLRRGGRTVGVIS
HLEELRTRIPTRLEVVAGRNGSRLAG
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcacgctctctcggtcaccgccttcgggccgttcgccggaacggtggaggtg
gacctggacgacgtgggccgggacggcctgttcctgctgtggggtcccacgggagcgggc
aagacgaccctgctcgacgcagtggtcttcgccctctacggccgggtgcccggcgcgcgc
ggcgaggagaagcggctccgcagcgaccacgcggacgtcggcacccgcaccgaggtcagc
tgcgagctgacgctgggcggcgagcgcctccgggtcgtccgccgccccgagcagcagcgg
ccgaagaagcgcggtgaggggtgggccaccgagcaggccaagctcgtcgtgtcccggttg
accgacggcggctgggaaccggtcagcacccggatcgacgagggctccgagcacctgcgc
agccggctgggcctggacgtccaccagttctgccaggtggtgctgctgccccagggcgac
ttcgcccgcttcctgcgtgcggagcccgagcaccgggccgagctgctgcgcacgctcttc
gacgtcgaccggttcgcccgcgccgaggactggctggccgaggagcgcgccgcggcccgc
gaccggatggccgcgcagcgcgcacggctgagcaccctgctcgcgcgcgtcgcccagagc
gccgacgtcgacgtgccggagggcctcgcgccggaactcgtgggggccgggccgggcgcc
ggcgtgctcccgtgggtgcagcgggtccgcgcctcggccggcgaacgcctggccgaggcg
gacgcgcgggcggccgaagccgccgcggaggtcgccacgacggacgccgagctggcagcc
gcgcgggccttgctggagcggtacgcacgccgcgaccaggcggcccgggagctcaccgcg
ctggaggaacgtgggccggctctcgtccccctgcgcaccgaacgcgacgccggccgccgg
gccgaaccactgcgcgacgtcctgcaggcggccggcgccgccgcgctggtcgccgagcag
gcagccgacggtctgcaggcggcgctccgggcctgggggccggtgtccagcggccaggag
gcgacgaccgcgctcgcccgcgagctccgcgaccgggcggccgaggcgcgggccctgctg
ccggaggtcgagcgggcggctgggctggagcgctcgatcgccggcctcgaccgcatcatc
gacgagctcggccagcggtgcgcggcggcggagcaggccgcggcggggttcccggcccgg
ttcgccgagcaggaggagcgggtcgcggcagcccgcgccgcggcggcggagctgcccgcc
ctccgttccgcgctggacatggcggaagcggcgctggcagcgggccgggccgccgaggcg
ctcgagcggcagctggccgggttccgcgacgacgtcctggggctgcgtgcggcctgggcc
gatgcccgcgaggtctggctggacctgcgcgcccgacggctcgacggcatggccgccgag
ctcgctgccgggctcgcagacggcgccgactgccccgtctgcggtgccacggagcacccg
cggccggccacctccggcggcgagcgggtcaccgcggccgacgaggacgccgcacacgtc
gccgcggacgcgcgggaatccgcgctcaccgcggccaccgcgcgcctcgacgcggccgaa
cgggagctcgccgggctgcgcgcccgggctgccacgctcgccccgggcgagcaggcggcg
ctggtcgaggacctgacgacgcgggtgcgtgcggccgccggggtggccgccgtcctgcgg
tcggcggaggagcaggtgcagcggctcgccggggagcgcgaggcggtcgccgcccggctc
gccgccgaccgcgaggaggtccgcgcccggacggcggagcgggactcactggccgcgggt
ctggccgacctcacacagcgcctggcggtcgcgcgcgcagcggaccccgacctggccacc
cgtgtcgctcggctgagcgccgtcgccgctgcctgcgaggcggtcgtggccgcgcacacc
gacgagctgcgggcccgggttcagcgcgacaccgcgcagcaggtcgccgaggagcgggcg
gcggcggccggcctcgacgacgtgctgaccgccgtctccgcgctgctcccgcccggcagg
ctggcccggctggaccgggagctggacgagcacgaccagcggctggcgctgctgcggggc
cgcctggccgagccggagctggccgacctgccgccccggccggacatggggtcgctggag
gaccgctgcgccggtgccacccggcgccgggaggaggccgtcgccgagctgcagcaggcc
cgccggtgcacggcgtccttggccgagctcgtcggccgggtcaccgccgcggagctggag
ctggccgaggagcgggactgggccgaccaggtcaccgcgctcgccgacctggcgcacggc
cgcggggccaacacccggcggatgcgcctccagtcgttcgtgctcgccgcccgcctggaa
caggtggccgaggtcgccagccgccggctgctggacatgtccggcggccgctacaccttc
ctgcacagcgacacccagggccggcacggcgcccgcggtgggctgggcctggacgtcttc
gacgagtacaccggtgtccggcgtccgacgaagaccctctcgggcggggagagcttcatg
gcctccttggcgctggcgctgggcctcgcggacgtggtcacggcggagaccgggggcgtg
cgcatcgacacgctcttcgtggacgagggcttcggcaccctcgacgcgcaggcgctggac
gcggtcatgaccgtgctcgacgacctgcgccgcggtggccgcaccgtgggcgtcatcagc
cacctcgaggagctgcgcacccgcatccccacccggctcgaggtggtcgccgggcggaac
ggatcacggctggccgggtga
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