Blastococcus saxobsidens: BLASA_4146
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Entry
BLASA_4146 CDS
T01752
Symbol
sbcD
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bsd
Blastococcus saxobsidens
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_4146 (sbcD)
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BLASA_4146 (sbcD)
Archaeal homologous recombinant proteins
BLASA_4146 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
FBPase_2
EndA_linker
Motif
Other DBs
NCBI-ProteinID:
CCG04973
UniProt:
H6RL06
LinkDB
All DBs
Position
complement(4011396..4012544)
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AA seq
382 aa
AA seq
DB search
MRLLHTSDWHIGRTLHGTDLLAEQEAVLGGLAAVVAEEQVDVVLVAGDVYDRAVPSADAT
AVLDRVIGRLLATGARVVLTPGNHDSARRLGTFSGLLSAAGLHVRAVTPRLDEPVLLADE
HGEVALYGLPYLEPEVARHELGVPEARGHEAVLREAMDRVRADLFLRPGVRSVVLAHAFV
GGGVASDSERDICVGGVDLVPARVFDGVDYVALGHLHRPQTLTPRIRYSGSPLAYSFGEA
GQQKQAWLVELDAAGLAEVRPVPLPTPRPLSVLTGTLEELLADPGHAAAEEHFVSARLTD
PARPADPMRRLQARFRFCVHLDWTGAGATGDAGSYQERMRGRSALDVAGEFVSHVRGVPA
SAAERELLARALGAADRAEVTR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctgcacacctcggactggcacatcggccgcaccctgcacggcaccgacctg
ctcgcggagcaggaggcggtcctgggcgggctggccgcggtggtcgccgaggagcaggtc
gacgtcgtcctcgtggccggcgacgtctacgaccgggcggtgccgtcggccgacgccacc
gcggtgctggaccgcgtgatcggccggctgctggccaccggtgcccgggtcgtgctcact
cccggcaaccacgactccgcgcgccggctgggcaccttctccggcctgctcagcgcggcc
gggctgcacgtccgcgcggtcactccgcggctcgacgagcccgtcctcctcgccgacgag
cacggcgaggtggcgctctacggcctcccgtacctggagcccgaggtggcccgccacgag
ctgggggtgccggaggcgcgcggccacgaggcggtgctgcgcgaggcgatggaccgggtg
cgggccgacctcttcctgcggcccggtgtccggtccgtggtgctggcgcacgccttcgtg
ggcggtggcgtggccagcgacagcgagcgcgacatctgcgtcggcggcgtcgacctggtg
ccggccagggtcttcgacggcgtcgactacgtcgccctcggccacctccaccgcccgcag
accctcaccccccggatccgctacagcggatctccgctggcctactccttcggcgaggcg
ggccagcagaagcaggcctggctggtcgagctggacgcggccggcctggcggaggtgcgg
ccggtgccgctgccgacgccgcggccgctgtcggtgctcaccggcaccctggaggagctg
ctcgccgatccggggcacgcggccgcggaggagcacttcgtctccgcgcgcctgaccgat
ccggcccgccccgccgatccgatgcggcggctgcaggcccggttccggttctgcgtccac
ctcgactggaccggcgccggcgcgaccggggatgccggcagctaccaggagcgcatgcga
gggcggagcgccctcgacgtcgccggcgagttcgtcagccacgtccgcggcgtgccggcc
agtgcggccgagcgggagctgctcgcgcgggccctgggcgcggccgaccgcgcggaggtc
acccgatga
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