Blastococcus saxobsidens: BLASA_4225
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Entry
BLASA_4225 CDS
T01752
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03420
Nucleotide excision repair
bsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLASA_4225 (pcrA)
03430 Mismatch repair
BLASA_4225 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_4225 (pcrA)
Enzymes [BR:
bsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLASA_4225 (pcrA)
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLASA_4225 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
BLASA_4225 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CCG05049
UniProt:
H6RLX0
LinkDB
All DBs
Position
complement(4095728..4098037)
Genome browser
AA seq
769 aa
AA seq
DB search
MSSLQQSLPGTAALPRSAPGSLGRELDRMLAGLNGPQRDAVVHEGSPLLIVAGAGSGKTR
VLTHRIAYLLGARGVQPGEILAITFTNKAAGEMKERVAALVGPRARSMWVSTFHSMCVRI
LRAEAAKLGMKSSFTIYDQGDSIRLMTMVARDLDLHAKRFPGRSLANQVSNLKNELVDED
AFSPQTPPERVLKDAYTLYQRRLREAHAMDFDDLIMTTVHLLQAFPDVAEHYRRRFRHVL
VDEYQDTNHAQYMLVRELTGTGEGPVPQAELCVVGDADQSIYAFRGATIRNIDEFERDYP
QATTILLEQNYRSTQRILKAANQVISKNTGRRPKNLWTDSGDGELIEGYVADNEHDEAAW
VAEQIDALVDEGTARPADIAVFYRTNNASRVFEEVFIRVGMPYKVVGGVRFYERKEVRDA
LAYLKLVANPADVVSLRRIINVPKRGIGDKAESCIESFADRERIAFGTALRRCAEVPDLA
TRSLKALQEFVSLLEEFEQLVETGSGPAALLESILDRTGYLAELQASTDPQDEGRVDNLN
ELISVAAEFEAASPGGTVTDFLEQVSLVADADQIPGPGGPGEDTAGVVTLMTLHTAKGLE
FPVVFVTGMEDGVFPHLRALGDPRELEEERRLAYVGITRARQRLFISRATVRTSWGQPAY
NPPSRFLDELPAETVHWARTDPAPAPSTGYRSAQTRVAATGLSTGGLRGGAGNRQVISVE
VGDRVSHDAFGLGTVVEVTGVGDKAQATVDFGSGGTKRLVLRYAPLVKL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgagcagcctccagcagtccctccccggcaccgccgccctgccgcgctccgcacccggc
tcgctggggcgggagctggaccggatgctggccggcctcaacggcccccagcgggacgcc
gtcgtccacgagggcagcccgctgctgatcgtcgccggcgccggatccgggaagacccgg
gtgctcacgcaccggatcgcctacctgctgggcgcccgcggggtgcagccgggggagatc
ctggcgatcaccttcaccaacaaggccgccggcgagatgaaggagcgcgtcgccgctctg
gtcgggccgcgggcgcgatcgatgtgggtgtcgacgttccactcgatgtgcgtgcgcatc
ctgcgcgccgaggcggccaagctgggcatgaagtcgtcgttcaccatctacgaccagggc
gactcgatccggctgatgacgatggtcgcccgcgacctggacctgcacgccaagcgcttc
ccggggcgcagcctcgccaaccaggtgtcgaacctgaagaacgagctggtcgacgaggac
gcgttctcgccgcagaccccgccggagcgggtgctcaaggacgcgtacacgctctaccag
cggcggttgcgcgaggcgcacgccatggacttcgacgacctgatcatgacgacggtccac
ctcctgcaggcgttccccgacgtcgcggagcactaccgccgccggttccgccacgtgctc
gtcgacgaataccaggacacgaaccacgcccaatacatgctggtccgggaactcaccggc
accggcgagggcccggtgccgcaggccgagctgtgcgtcgtcggtgacgccgaccagtcg
atctacgccttccgcggcgcgacgatccgcaacatcgacgagttcgagcgcgactacccg
caggccacgacgatcctgctggagcagaactaccgctccacccagcggatcctcaaggcg
gccaaccaggtcatctccaagaacaccggccgccgtcccaagaacctgtggacggactcg
ggcgacggcgagctgatcgagggctacgtcgccgacaacgagcacgacgaggccgcctgg
gtcgccgagcagatcgatgccctggtcgacgagggcacggccaggcctgccgacatcgcg
gtcttctaccgcacgaacaacgcctcgcgggtgttcgaagaggtcttcatccgcgtcggc
atgccctacaaggtcgtcggcggggtgcggttctacgagcgcaaggaggtccgcgacgcg
ctggcctacctgaagctggtggccaacccggccgacgtggtgagcctgcgccggatcatc
aacgtgcccaagcggggtatcggcgacaaggccgagtcgtgcatcgagtccttcgccgac
cgggagcggatcgcgttcggcacggcgctgcggcggtgtgccgaggtgcccgacctcgcg
acgcgctccctgaaggccttgcaggagttcgtctcgctgctcgaggagttcgagcagctg
gtcgagaccggctcgggtccggccgcgctcctggagagcatcctcgaccgcaccggctac
ctggccgagctgcaggccagcaccgatccgcaggacgaggggcgggtcgacaacctcaac
gagctcatctcggtggccgccgagttcgaggccgcgagcccggggggcacggtcaccgac
ttcctggagcaggtctccctggtggccgacgccgaccagatcccaggtcccgggggaccc
ggggaggacacagccggcgtggtgacgctgatgaccctgcacaccgccaaggggctggag
ttcccggtcgtgttcgtgaccggtatggaggacggcgtcttcccgcacctgcgcgcgctc
ggcgacccgcgggagctggaggaggagcgccggctggcctacgtggggatcacccgggcg
cggcagcggctgttcatctcgcgggcgacggtgcgaaccagctgggggcagccggcctac
aacccgccgtcgcggttcctcgacgagctcccggccgagaccgtgcactgggcccgcacc
gacccggccccggcgccgtcgaccggttaccggtcggcgcagacgcgggtggcggccacc
gggctctccacgggcggtctgcgcggcggggccggcaaccggcaggtgatctccgtggag
gtcggcgaccgggtgagccacgacgccttcgggctgggcacggtggtcgaggtgaccggc
gtgggcgacaaggcccaggccacggtcgacttcggctccggcggcaccaagcgcctcgtc
ctccggtacgccccgctcgtcaaactctga
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