Blastococcus saxobsidens: BLASA_4270
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Entry
BLASA_4270 CDS
T01752
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLASA_4270 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsd03021
]
BLASA_4270 (rpoA)
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_4270 (rpoA)
Enzymes [BR:
bsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLASA_4270 (rpoA)
Transcription machinery [BR:
bsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLASA_4270 (rpoA)
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLASA_4270 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CCG05094
UniProt:
H6RMQ6
LinkDB
All DBs
Position
complement(4136537..4137613)
Genome browser
AA seq
358 aa
AA seq
DB search
MLIAQRPTLTEETISEQRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIEGTL
HEFTTVPGVKEDVTEVILNLKGLVVSSDSDEPVTMYLRKQGPGEVTAADIAPPAGVEVHN
PELHIATLNGKGRLEIELVVERGRGYVPAPQNKQPGQEIGRIPVDSIYSPVLKVTYAVEA
TRVEQRTDFDRLVVDVESKPSIAPRDAIASAGSTLVELFGLLRELNIEAEGIEVGPSPAE
AADIANFSMPIEDMDLTVRSYNCLKREGVHTVGELVTRSEADLLDIRNFGAKSIDEVKMK
LAAMGLALKDSPPGFIPTSIESYDEGYETDAYQGTGEYAAGYDQAQYNEGSFQETEQL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgcacagcgccccacgctgaccgaggagaccatctcggagcagcgctcgcgg
ttcatcatcgagccgctcgagccgggtttcggctacaccctcggcaactccctgcggcgc
acgctgctgtcctccatccccggtgcggcggtcaccagcatccgcatcgagggcaccctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgaggtcatcctgaacctc
aagggcctcgtggtcagctccgactccgacgagccggtgaccatgtacctgcgcaagcag
ggccccggtgaggtcacggcggcggacatcgcccccccggccggcgtcgaggtgcacaac
cccgagctgcacatcgccacgctgaacggcaagggccggctggagatcgagctggtcgtc
gagcggggccgcggctacgtgcccgcgccgcagaacaagcagcccggccaggagatcggc
cgcatccccgtggactcgatctactcgccggtcctcaaggtcacctacgccgtcgaggcg
acccgtgtcgagcagcgcaccgacttcgaccgtctggtcgtcgacgtcgagagcaagccg
tcgatcgccccgcgggacgccatcgcgtcggccgggtcgaccctggtcgagctgttcggc
ctgctgcgcgagctcaacatcgaggcggagggcatcgaggtcgggccgagcccggccgag
gctgccgacatcgccaacttctcgatgccgatcgaggacatggacctcacggtccggtcc
tacaactgcctcaagcgcgagggcgtgcacaccgtcggtgagctcgtcacccgttccgag
gccgatctgctggacatccggaacttcggggccaagtccatcgacgaggtcaagatgaag
ctggcggccatgggcctggcgctcaaggacagcccgcccgggttcatcccgacgtcgatc
gagagctacgacgagggctacgagaccgacgcctaccagggcaccggcgagtacgccgcc
ggctacgaccaggcccagtacaacgagggctccttccaggagaccgagcagctctga
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