Bacillus selenitireducens: Bsel_1810
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Entry
Bsel_1810 CDS
T01243
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bse
Bacillus selenitireducens
Pathway
bse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bsel_1810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bse03019
]
Bsel_1810
03009 Ribosome biogenesis [BR:
bse03009
]
Bsel_1810
Enzymes [BR:
bse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bsel_1810
Messenger RNA biogenesis [BR:
bse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bsel_1810
Ribosome biogenesis [BR:
bse03009
]
Prokaryotic type
rRNA helicases
Bsel_1810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
NAT10_TcmA_helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADH99317
UniProt:
D6XU31
LinkDB
All DBs
Position
2009357..2010943
Genome browser
AA seq
528 aa
AA seq
DB search
MMTFEEFNISKSLMRAIKEMGFEAPSPIQEKVIPTILEGNDLIGQAQTGTGKTAAFGIPI
LEKLKRTKNVQAIILTPTRELAIQVAGEIQKLSKFQKVQTLPVYGGQSIGQQIKQLKRGV
DIVVGTPGRVLDHVNRKTLDLSKIHTFVLDEADEMLDMGFIEDIEKIIQVSSEERQTLLF
SATMPPPIRKLSNKYMNSPEQVTISKSEVTAPSINQVYYKVLEKNKLDSLCRLIDSENTD
LGIIFCRTKKGVSELAEALQARGYRADGLHGDLTQSQRDSVMKKFRDSSIDFLIATDVAA
RGIDVQNVTHVVNYDIPQDPESYVHRIGRTGRAGREGIALTLVTPREMKHLRSIENEIKM
KIPSQNLPSVEEVIEKQQDVWKSQVIDMIENDDEGVSHYDAIVTDLLDHYQPEKVVTALM
KLAFYSHDEKISKETYNFGETGAQKGMTRFFINVGRNVDMTPKKLVDEVAKLVGISPKAI
GKIDIFENFTFIEVPEEVAPFVYEGLKYQRVSGAKINLEPAKPRPKRK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgtttgaagagtttaatatttcaaagagtttaatgcgagcaatcaaggaaatg
ggatttgaagccccgtctccaattcaggaaaaagttattccgacaattttagaaggaaac
gacttgatcggacaagcacagacaggtaccggtaagacagcagctttcgggattccgatt
cttgaaaagctgaaacggacgaaaaatgtgcaagcgattattttaacaccaacgcgcgaa
cttgcgattcaggttgcaggtgagattcagaagctctccaagtttcagaaagtgcagacg
ttgcccgtttacggcggacagtcgatcggtcagcaaatcaagcagctgaaacgaggcgta
gatatcgttgttggtacaccagggcgagttctggatcatgtcaatcgaaagacattggat
ctcagtaaaattcataccttcgttctcgacgaagcagatgaaatgctcgatatgggattc
atcgaagatatcgagaaaatcatacaggtttcatcggaagagcgtcaaacgcttttattc
tccgcgacgatgcctccgccaattcgtaagctgtccaataaatacatgaacagcccggag
caggtgaccatcagtaaaagtgaggtaacagctccttcgattaatcaggtatattataaa
gtgcttgagaaaaataaactcgattcactgtgccgtctcattgacagtgagaatacagat
ctcgggatcatcttctgccgtacgaagaaaggtgtttctgaactcgctgaagcacttcag
gcgcggggatatcgtgccgatggcctgcacggtgatttgacacaatcccagcgtgattca
gtcatgaaaaaattccgtgattcttcaatcgattttctgattgcaactgacgttgctgca
cgcggcattgacgtacaaaatgtgactcacgttgtaaactatgacattcctcaggaccct
gagagttatgttcaccgtattggccgaactggtcgagccggacgagagggtattgcgttg
acgcttgtgactcctcgtgagatgaaacatctccgttcgattgaaaacgaaataaaaatg
aagataccttcccaaaaccttccttctgttgaagaagtgattgaaaagcaacaggatgtt
tggaagagtcaggttattgatatgattgaaaatgatgatgaaggggtcagtcattacgac
gcaattgttacagaccttttggatcactatcagcctgaaaaagtcgttacggctctcatg
aagcttgctttttacagtcatgacgagaagatcagtaaagagacctataatttcggtgaa
acaggagcccaaaaaggcatgacccgtttctttatcaatgttggacggaatgttgacatg
acgccgaaaaagctggttgatgaagtggctaaacttgttgggatcagcccgaaagcgatt
ggaaaaattgatatttttgagaacttcacgttcattgaggtgcctgaagaagtcgcaccg
ttcgtttatgaaggcttaaagtatcagcgtgtcagtggcgcgaaaatcaatttggaacct
gcgaaaccaagaccgaaacgaaaataa
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