Bacillus selenitireducens: Bsel_1937
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Entry
Bsel_1937 CDS
T01243
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bse
Bacillus selenitireducens
Pathway
bse03030
DNA replication
bse03430
Mismatch repair
bse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bsel_1937
03430 Mismatch repair
Bsel_1937
03440 Homologous recombination
Bsel_1937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bse03032
]
Bsel_1937
03400 DNA repair and recombination proteins [BR:
bse03400
]
Bsel_1937
Enzymes [BR:
bse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bsel_1937
DNA replication proteins [BR:
bse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bsel_1937
DNA repair and recombination proteins [BR:
bse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bsel_1937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_B_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADH99441
UniProt:
D6XUF5
LinkDB
All DBs
Position
complement(2145322..2146023)
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AA seq
233 aa
AA seq
DB search
MNPVTQLIRQLSGIVQGGDKNNPAGAAFIKEAEKAAKEKMDLDIPLRALSGTVFDLETTG
FFPQKQDRILSIGGVKIKNNEITDDTFYSFVYYDQPISETIRHLTGIQEEDVLNAPAEAD
VLTRFFAFAEDDLFIAHHAAHEKGFMQDALWRSFRATFQRRLIDTIFLTKLQPDLRDTAE
LEACCRYFNIEPAGRHHALHDAKLAAELWIHSVNVMESMGIHTLKDVYRALSR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgtaactcaactgatcagacaactgtccggtatcgttcaagggggggacaag
aacaacccggcgggtgcggcatttataaaagaggcggagaaggcagccaaagaaaaaatg
gaccttgatattccacttcgcgctctgtcaggaaccgtgtttgaccttgagaccacgggg
ttcttccctcaaaagcaagacagaattctctcgattggcggggtgaaaatcaaaaacaat
gagatcacggatgatacgttttacagctttgtctattacgatcaacccatatctgaaacc
atccggcatttaacaggcattcaggaagaagatgtcctgaatgccccggctgaagctgat
gtattaacccgtttcttcgctttcgctgaggatgatctgtttattgctcaccatgctgcc
cacgaaaagggctttatgcaggatgcgttgtggcgttcctttcgggcgacgtttcaacgg
cgtcttattgacacgatctttttgaccaaactgcaacctgatctgcgagacactgccgaa
ctcgaagcctgttgcaggtactttaatatcgaaccggcaggcaggcaccatgctcttcat
gatgcaaagctcgcagctgagctatggatccattctgtcaacgtcatggagagcatgggc
atccatacactcaaagatgtgtaccgcgccctttcaagataa
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