Bacillus selenitireducens: Bsel_2797
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Entry
Bsel_2797 CDS
T01243
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bse
Bacillus selenitireducens
Pathway
bse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bsel_2797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bse03019
]
Bsel_2797
03400 DNA repair and recombination proteins [BR:
bse03400
]
Bsel_2797
Enzymes [BR:
bse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bsel_2797
Messenger RNA biogenesis [BR:
bse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bsel_2797
DNA repair and recombination proteins [BR:
bse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bsel_2797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADI00288
UniProt:
D6XZ03
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All DBs
Position
3022244..3024019
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AA seq
591 aa
AA seq
DB search
MLTAAKEKLHSHFGYGEFRTGQEEIMSYLFQGQSTLGIMPTGGGKSVCYQIPSLILDGVT
IVISPLISLMKDQVDELSALGISATFINSSLSYEEVRSRFQGIRQGTYQLVYIAPERLES
PGFNAMFEQLPVSLIAVDEAHCLSQWGHDFRPSYLRIPELIGRLFEPPPVLALTATATPE
VADGIVSILGIPASNRVQTGFARENLAFHVAKGEDNTRYIKDYLLRNPHASGIIYAATRK
EVERIYARLLKQNIKVGRYHGGMTQDDRRSIQEAFVYDELQVMVATNAFGMGINKSNVRF
VIHAQMPRNIESYYQEAGRAGRDGEPGECILLFDAQDIRIQQFLIDQSDLDDQRKKQEFQ
KLQAMINYCHTEGCLQEYILHYFGDRHTTPCGKCSECADDRSIADVTRDAQMVLSCIHRM
GERFGKTMVAQVLVGSRNKKLLEMKFHKLSTYGLMKEKSQKDVTQFIDYLVASQVLVLDG
GGYPVLKLTEQCLPILKGKVKVYRKETKQPKELTKEDPLFIQLRELRSKLAKEHDVAPYM
VFSDRTLNEMAERQPVTESAMLQIKGVGESKLDSYGRPFMKLITQYRLDND
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgcagccaaggaaaaactacacagtcattttggatacggtgaattcaggacc
ggccaggaagagatcatgagctatctttttcagggacagtccacgcttggcatcatgccg
acaggcggggggaaatccgtctgttatcagattccttccctgatacttgacggagtcacg
atcgtcatttcacccctgatttcgctgatgaaagatcaggtcgatgaactgagtgccctt
ggcatctcagcgacattcatcaactcatcgctctcttatgaagaagtgcgcagccggttc
caggggatccgtcaagggacgtaccagctcgtctatatcgctcctgagcgccttgaatcc
ccggggttcaacgccatgtttgaacagctccccgtctcgctcatagccgtagacgaggca
cattgcctctctcaatgggggcatgacttccgcccgagctatctgaggattccggagctg
atcggacgtctctttgaaccgccgccggtgcttgcattaaccgcgacggcaacgcctgag
gtggccgacggcatcgtgtcgatcctcggtattcccgcaagtaaccgggttcagaccggt
tttgcccgggagaacctcgcctttcatgtggccaaaggggaagacaatacccgctacata
aaagactacctccttcgaaacccccatgcttccggcatcatttatgcggcaacccgtaaa
gaggttgagcggatctatgcgcggctcttaaagcaaaacatcaaggttggccgctaccac
gggggcatgacgcaggatgaccggagatcgattcaggaagcctttgtttatgacgagctt
caggtcatggtcgcaacgaatgcctttggcatggggatcaacaaatccaacgtccgcttc
gtcattcatgcgcagatgccaagaaacatcgaaagctattatcaggaagccggacgtgcg
gggcgtgacggggaacccggagaatgcattctgttattcgatgcacaggatatccgcatc
cagcagttcctgattgaccagtcagatcttgacgaccagcggaagaagcaggaattccaa
aaactgcaggcaatgatcaactactgccatacggaaggatgcctccaggaatacattctc
cactattttggggacaggcatacaactccatgcggcaagtgctcggaatgtgccgatgac
cgctccattgcagatgtaacaagggacgcacaaatggtgctttcctgcattcaccgcatg
ggcgaaaggtttggcaagacgatggtcgctcaggtgcttgtcggcagccggaacaagaag
ctcctcgagatgaagttccataagctttccacttacggactgatgaaagagaaatcccaa
aaagacgtcacccagttcattgactacctcgtcgcttcccaggtcctcgtcctcgatggc
ggcggctacccggtcctgaagctgactgaacaatgtctgccgatcctgaaaggcaaggtc
aaggtataccgaaaagaaacgaaacagccgaaggaactcaccaaagaagatccgctcttc
atccagctccgggaactccgttcaaaactggccaaagagcacgatgtcgctccttacatg
gtcttctccgaccgcacgttaaatgaaatggcagagagacagcccgttaccgaatcggct
atgctccaaatcaaaggggtcggggagtcgaaactcgattcatacggcaggccgtttatg
aaactgatcacgcagtaccgcctcgacaacgattaa
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