Bradymonas sediminis: DN745_01450
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Entry
DN745_01450 CDS
T05497
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bsed
Bradymonas sediminis
Pathway
bsed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DN745_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsed03400
]
DN745_01450
Enzymes [BR:
bsed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DN745_01450
DNA repair and recombination proteins [BR:
bsed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DN745_01450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
OB_YrrC
Viral_helicase1
HHH_5
AAA_11
SLFN-g3_helicase
UvrD-helicase
Helicase_RecD
AAA_22
AAA_28
PIF1
UvrD_C
PhoH
nSTAND3
AAA_16
HHH_2
AAA
DEAD
NTPase_1
TrwB_AAD_bind
AAA_23
ATPase_2
AAA_29
ABC_tran
FtsK_SpoIIIE
cobW
AAA_12
NPHP3_N
AAA_18
AAA_24
FKTN_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AWV88068
UniProt:
A0A2Z4FH72
LinkDB
All DBs
Position
386531..388744
Genome browser
AA seq
737 aa
AA seq
DB search
MKSTDQNQSAELEVLKGELSRIRFASENGEFAVCDLELRSGKTVTLVGNTLGAQPGESVE
VRGTWQKDPRFGRQFAIASIRAVAPTTREGIEKYLSSGLIEGVGPVLARRIVAHFGEDTL
DLLDAAPGRIREVEGIGKVRAERIQAAWGEQRLVRSVMVFLQSHGVSPGFAAKIWKEYGD
QSVAIVRENPYQLAEDIRGIGFRSADAIALDTGLARDSLARLRAGVLYALRQAHSDGHIY
LPMDELKARAVELLGVPMDMLGAAIESLTHDDRVVVEALGGGRAPAVYRAAAHRAESGAA
ERLLELLQTNSLLKFGDLEAHLQAYLDAQRSGDAPFELAPEQRRAVLAVFEQKVAVITGG
PGTGKTTIIRAVVALADKLNQRVALAAPTGRAAKRMSEACGREARTIHRLLEFAPGEGGF
KYDKKRPLDVDLVVIDEASMLDTYLLHALVRALPPRCALLLVGDIDQLPSVGPGHILGDI
IDSGRVAVLRLTRVFRQARESSIIANAHRVNAGQMPVAPAHGGDKLVDFYTIAAASPLEA
QQKILDLITDRIPNAFGLDPLNDVQILSPMHKGEVGCGQLNTLIQARFNPLSAPLEHGSK
LWKVGDKVMQVRNNYDLDVFNGDIGQIQAIDRDAETVRVGFDGRPVTYKFSSLDELVLAY
AITVHKSQGSEYPAVILPMLTQHYVMLQRNLLYTALTRAKSLVIIVGSEKAVSIATANHE
AQMRYTRLAERLRAQGS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaccgaccaaaatcaaagcgccgagctcgaagtgctcaaaggggagctgagc
cggattcgcttcgccagcgagaacggtgagttcgcggtgtgcgatctggagttgcgatcc
ggcaagaccgtcacgctggtgggcaatacccttggcgcccagcccggcgagtcggtcgag
gtccgtggcacctggcaaaaagacccgcgctttggccggcaattcgcgatcgcctcgatc
cgcgcggtcgcgccgaccacgcgcgagggcatcgagaaatatctttctagcgggttgatc
gagggcgtcggcccggtgctggcgcgccggatcgtcgcgcattttggcgaagacaccctc
gatcttctggacgccgcgcccgggcgcatccgcgaggttgaggggatcggcaaggtgcgc
gccgagcggattcaggcggcctggggcgagcagcgcctggtgcgaagcgtcatggttttc
ttgcaatcccacggcgtctcgccggggtttgccgccaagatctggaaggaatacggcgac
caatcggtggcgatcgtgcgcgagaatccctaccaattggccgaggatatccggggcatc
gggtttcgcagcgccgacgcgatcgccctggacaccgggctcgcccgggactcgctggcg
cggcttcgcgccggcgtgctctacgcgcttcgccaggcgcactcggacgggcatatctac
ctgcccatggacgagttaaaggcccgcgcggtcgagctcttgggggtgccgatggatatg
ctgggcgcggcgatcgagtcgctgacccacgacgatcgcgtggtcgtcgaggcgctgggc
ggcgggcgggcgccggcggtgtatcgcgccgccgcccaccgcgccgagagcggcgccgcc
gagcggctcctcgagttattgcagaccaactcgttgctgaaatttggcgatctcgaggcg
catcttcaggcctatctcgacgcgcagcgcagcggcgatgcgccctttgaactcgcgccc
gagcagcgccgggcggtgctcgcggtcttcgagcaaaaagtggcggtcatcaccggcggg
ccgggcaccggcaagaccacgatcatccgcgcggtggtggcgctcgccgacaagctcaac
caacgcgtcgcgctcgccgcccccacgggccgcgccgccaagcgcatgagcgaggcctgc
gggcgcgaggcgcgcaccattcaccgcctgctcgagttcgcgccgggcgagggcgggttc
aaatacgataagaagcgcccgttggacgtcgatcttgtggtgatcgacgaggcatcgatg
ctcgacacctaccttttgcacgccctggtgcgcgcgctgcccccgcgctgcgccctgctg
ctggtgggcgatatcgaccaacttccgagcgtcgggcccggccacatcttgggcgatatc
atcgacagcgggcgcgtcgcggtgctgcggttgacccgcgtttttcgccaggcgcgcgag
tcgagcatcatcgccaacgcccaccgcgtaaacgccggccagatgcccgtcgccccggcc
cacggcggcgacaaattggtcgatttttataccatcgccgccgcctcgccgcttgaggcc
cagcagaagatcctcgatctcatcaccgatcgcatccccaacgccttcgggctcgacccg
ctcaacgacgtgcagatcctgtcgcccatgcataagggcgaggtcggctgcgggcagctc
aatacgctgattcaggcgcgctttaacccgctcagcgccccccttgagcacggctcaaag
ctgtggaaggtcggcgataaggtcatgcaggtgcgcaacaattacgatctcgacgtgttc
aacggcgatatcggccagattcaggcgatcgaccgcgacgccgagaccgtgcgcgtcggc
ttcgacggccgcccggtgacctataaattctcgagcctcgacgagctcgtgctggcctac
gcgatcaccgtgcacaagagccagggcagcgaatacccggcggtgatcctgccgatgctc
acccagcattatgtgatgttgcagcgaaaccttttgtataccgcgctgactcgggctaag
agtctggtcatcatcgtgggctcggagaaggccgtcagcatcgccacggccaaccacgaa
gcccagatgcgctatacccgcctggccgagcgcctgcgcgcccagggatcgtag
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