Bradymonas sediminis: DN745_01930
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Entry
DN745_01930 CDS
T05497
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsed
Bradymonas sediminis
Pathway
bsed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN745_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsed03019
]
DN745_01930
03400 DNA repair and recombination proteins [BR:
bsed03400
]
DN745_01930
Enzymes [BR:
bsed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DN745_01930
Messenger RNA biogenesis [BR:
bsed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DN745_01930
DNA repair and recombination proteins [BR:
bsed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DN745_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWV88159
UniProt:
A0A2Z4FGU1
LinkDB
All DBs
Position
complement(515061..516938)
Genome browser
AA seq
625 aa
AA seq
DB search
MDAATAVQKQTPQAALKARFGYDNFRGGQLEVVEALLAGEDVLAVMPTGSGKSLCFQLPA
CMLEGTALVISPLIALMKDQVDAMEQAGVSATQINSSVDYPEQIRRLERMVAGDYDIVYV
APERFRNAEFRRAIDQISISLLAIDEAHCISQWGHDFRPDYLNLDAVREQLGCPPTIALT
ATATSQVQEDILEQLAISDARRVVSGFERPNLFYDVIEAASHEEKVSQVERLLHQRRGES
VIVYCATRRQVTEVTESLKSHGWLASSYHAGLNDVARAQVQDGFMAGDLPILVATNAFGM
GVDKSDVRTIFHYNIPGSLEAYYQEAGRAGRDGEPAECVLLYSRRDGRIHDFFTDNSFPE
QELVERVWLLLFKRGLDTHALSADQICDHLNRSGKSGRVHSWGVATALQLLEEAGHIRTG
FSSDGPHAGEAWVEVLDRARLRDLRVDWERLARQRKLAKRQSADMRNYALDRGCRQTSLL
RYFNSKPSYKGGCGHCDRCCGHLKVGRQGRGARSASDDTAETVVRKVLSGVARAREHATP
VRVAAMLRGSPSQQLQRLGLDKVSTFGILDYLNQQDLFDLISACAEAQLIEPSGAARVEL
SEVGVEVMLAKRRAPSALLRMLEPA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgcgacggccgttcaaaaacagaccccccaggccgcgctcaaagcgcgtttt
ggatacgataatttccgcggtggccagctcgaggtcgtcgaggcgctgctggccggcgag
gatgtcctcgccgtgatgccgaccggctcgggcaaaagcctgtgcttccaattgccggcc
tgcatgctcgaggggaccgcgctggtcatatcgccgctcatcgcgctgatgaaagaccag
gtcgacgcgatggagcaagcgggcgtttccgccacgcagatcaactcatcggtcgattat
cccgagcaaatccggcgacttgagcgcatggtcgcgggcgactacgacatcgtttatgtc
gccccggagcggtttcgaaacgccgaatttcgccgggcgatcgaccagatatcgatcagc
cttctggccatcgatgaggcgcattgtatcagccaatgggggcacgacttccgcccggat
tacctgaacctcgacgcggtgcgcgagcaattgggttgcccgccgaccatcgcgctgacc
gcgaccgcgaccagccaggttcaggaagatatcctggagcaattggcgatcagcgacgcg
cggcgcgtcgtctcggggttcgagcggccgaatctcttttatgatgtcatcgaggcggcc
agccacgaggaaaaggtctcgcaagtcgagcgcctgctgcaccagcgacgcggcgagtcg
gtgattgtctattgcgccacgcgccgccaggtgaccgaggtcaccgagagcctcaagagc
cacggctggctggcctcgagctaccacgcggggctcaacgatgtggcgcgcgcccaggtt
caggacggctttatggccggcgatttgccgatcttggtggccaccaacgccttcggcatg
ggcgtggataagtcggatgtgcgtacgatctttcactataatatccctgggagtcttgag
gcctattatcaggaagcaggccgcgccgggcgtgacggagaacccgccgagtgcgtgctg
ctctatagtcggcgtgacgggcgcatccatgactttttcacggataactcattcccggaa
caggagcttgtggagcgcgtttggctgctcctatttaagcgcggcctggacacacacgcg
ctgagcgccgatcagatctgcgaccatttgaatcgttcgggcaaatcgggccgcgtgcat
tcttggggggtcgcaacggcgctgcaattgctcgaagaggccggccatatccggacgggg
ttctcgtccgacggaccacacgcaggcgaggcctgggtggaagtcctggaccgcgcgcgg
ctgcgcgatctgcgggtggattgggaacgactcgcgcgccagcgaaagctggccaaacgc
cagtccgccgacatgcgaaattatgccctggatcgcggctgtcgccagaccagcctgctg
cgctattttaatagtaagcccagctataagggtggctgcgggcattgcgaccgctgctgc
ggacacctcaaggtggggcgccagggacgcggcgcgcgctccgcatccgatgatacggcc
gagacggtcgtgcgaaaggtcttaagcggcgtggcgcgcgcccgagagcacgccacgccg
gttcgcgtcgccgcgatgctacgcgggtcaccctctcagcagctgcagcgccttgggttg
gataaagtctcgacgtttgggattctggactatttgaaccagcaggatctcttcgatctt
atttcggcttgcgcggaggcgcagttgattgagccaagtggcgccgcgcgcgtcgagttg
agcgaggtcggcgtcgaggtaatgcttgccaaacgtcgtgcaccgtcggcccttctgcgc
atgctagagcccgcctaa
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integrated database retrieval system
