Bradymonas sediminis: DN745_03590
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Entry
DN745_03590 CDS
T05497
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bsed
Bradymonas sediminis
Pathway
bsed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DN745_03590 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsed03400
]
DN745_03590 (recD)
Enzymes [BR:
bsed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DN745_03590 (recD)
DNA repair and recombination proteins [BR:
bsed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DN745_03590 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
AAA_22
PhoH
SLFN-g3_helicase
AAA_16
nSTAND3
NTPase_1
PIF1
NPHP3_N
DEAD
MeaB
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AWV88477
UniProt:
A0A2Z4FHL3
LinkDB
All DBs
Position
complement(951977..954196)
Genome browser
AA seq
739 aa
AA seq
DB search
MSSTPVLFPSGTLRHKYDQASKVDSTDAVLSAIAQVSGKLYIDPTLVWTAKYLVSTEAAL
DADDRLGLTLIVFALLVSISEGSTRVPLAPEGAETDASYLNTLLGRLHDLLQQVARGEGS
AEAAIPPNAEQLLSAAKEIAAIRGSNPGQLLSNEQLATLLARVDPMARGEEIPYRPLLIC
GPPERRALTSERMLRKEDALAERLMKLSRKSVDTNVDDGLDEVANYPTYFWNGGDWQEQR
LNPAQAQAAQFATRSRLAFVTGGPGTGKTTIIVTILRQLVRMGVKPGDIALAAPTGKAAY
RMRESALEQLNSLDKNPLRADGPAPAVPLKDLELQHYLPEARTLHRLLEYSPGRDIFRRN
KKNPLEAKVVICDEASMIDLDMMHALVDALGEETRLILVGDADQLPPVGGGQPFRDLIEG
APTHALAADGPAPKNVMSAFTTRLEHSYRMDANDQGGKRILELARAVLACTEANTASVQT
HLESMVSAENLNAYLARPEGVAQLEEDAKLDAFLSAWFEHFVVFQEDEMPARAEFERGED
GFDAATTEAIERVFEHHARARILCLTQVSKTGARAINKTLHKRFFETYSDPDRRPKNAPK
FMHLEPVMVTQNNYDLNIFNGDIGLVAKVSRSGKNARRKVIFPRSDGGWRVISLAQISGQ
LEHAFATSVHKSQGSEFKHIALVMPPETMSLLSKELLYTAVTRASKSVTLLDPAGLFARG
AATSMVRHTGLPERLGVYG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaccccggtattattccccagcggcacgctccgacataaatacgaccaggct
tcgaaggtcgacagcaccgacgcggtgctcagcgccatcgcgcaggtttcgggcaagctt
tatatcgatccgaccctggtctggacggccaaatatctggtgagcaccgaggccgccctc
gacgctgacgaccgccttgggctgacgcttatcgtcttcgccctgctggtgtcgatcagc
gaggggagcacgcgcgtgccgctggctcccgagggcgccgagaccgacgcgagctacctc
aacacgctgctggggcgcctccacgacctgctccaacaggtcgcccgcggcgagggaagc
gcggaggcggccatccccccgaacgccgagcaactcctgtcggcggccaaagaaatcgcc
gccattcgcgggtcgaaccccggccaattgctgagcaacgagcagctcgccacgctcctc
gccagggtcgacccgatggcgcgcggcgaagagatcccctaccgcccgctccttatctgc
ggcccgcccgagcggcgcgcgctgaccagcgagcggatgctgcgaaaagaagacgccctc
gccgagcgcctgatgaagctcagccgaaagagcgtcgacacgaatgtcgacgacggcctc
gatgaagtcgccaattacccgacctatttttggaatggaggcgactggcaggagcagcgc
ctgaacccggcgcaggcccaggccgcgcagttcgcgacgcgctcgcgcctcgccttcgtg
accggcggacccggcaccggcaagaccaccattatcgtgacgattctgcgccaattggtg
cgcatgggcgtcaagcccggcgatatcgcgctggccgcgcccacaggaaaggccgcctat
cgcatgcgcgaatcggcgctcgagcagctcaactccctcgacaaaaacccgcttcgcgcc
gacggcccggccccggcggtcccgctcaaagacctggaattacagcattatcttcccgag
gctcgcacccttcaccgcctgctcgaatactcaccggggcgcgatatcttccgacgaaat
aagaagaatccgctggaggcgaaggtcgtcatctgtgacgaggcgtcgatgatcgacctc
gatatgatgcacgccctggtcgacgcgctgggcgaggagacgcggcttatcttggtgggc
gacgccgaccaactcccgccggtgggcggcggacagccctttcgcgacctcatcgaaggc
gcccccacccacgcgctggccgccgacgggccggcccccaagaacgtcatgagcgccttc
accacgcgccttgagcatagctatcgtatggacgcaaacgaccagggcggcaagagaatc
ctggagttggcccgggcggtgctggcctgcaccgaggccaacaccgcgtcggtccagacg
cacctcgagtcgatggtttcggccgagaacctgaacgcctatctcgcgcgccccgagggc
gtggcgcagctcgaggaggacgcaaaactcgacgcgttcctgagcgcctggttcgagcat
ttcgtcgtgtttcaggaggatgagatgccggcgcgcgccgagtttgagcgcggcgaggac
ggcttcgacgcggccacgaccgaggcgattgagcgtgtgtttgaacaccacgccagggcg
cgaatcctctgcctgacgcaggtctcaaagaccggcgcgcgcgccatcaataagaccctg
cacaagcgcttcttcgagacctattcggacccggatcgccggcctaagaacgcgcccaaa
tttatgcatctcgagccggtcatggtcacccagaataattacgacctcaatatctttaac
ggcgatatcgggctggtggcgaaggtctcgcgcagcggtaaaaacgcgcgccgaaaggtc
atcttcccccgctccgacggcggctggcgcgttatctccctggctcaaataagcggccaa
ctcgagcacgcctttgccaccagcgtgcacaaatcccagggcagcgagttcaagcatatc
gcgctggtgatgccgcccgagacgatgtcgctgctgagcaaagaattgctctataccgcg
gtgacccgcgcctcaaaatcggtcaccctgctcgacccggcggggctattcgcccggggc
gcggcgacctcgatggtgcgccacaccggcctgcccgagcgcctcggggtctacggctaa
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