Bradymonas sediminis: DN745_07535
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Entry
DN745_07535 CDS
T05497
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bsed
Bradymonas sediminis
Pathway
bsed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DN745_07535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsed03400
]
DN745_07535
Enzymes [BR:
bsed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DN745_07535
DNA repair and recombination proteins [BR:
bsed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DN745_07535
RecFOR pathway proteins
DN745_07535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Sigma54_activat
nSTAND3
AAA_3
AAA_14
AAA_18
AAA_22
TsaE
Rad17
RNA_helicase
Mg_chelatase
AAA_28
AAA_33
AAA_17
Sigma54_activ_2
bpMoxR
NTPase_1
ABC_tran
Zeta_toxin
NB-ARC
NACHT
AAA_25
IstB_IS21
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AWV89199
UniProt:
A0A2Z4FJS3
LinkDB
All DBs
Position
complement(2011064..2012182)
Genome browser
AA seq
372 aa
AA seq
DB search
MSKESKIAKTSAIEPSQIESSAIEPSTIESSPIAVSQEARNPSLEREAAPDDEALDRALR
PHTFGDFVGQRAIKENLGVMVESARMRKATLDHILLSGPPGLGKTTLAHILAREMGATIH
VTSGPALEQKKDLAGILSALDHGDMLFIDEVHRLNPVIEENLYPAMEDQYFDVVVGSGPQ
ARSMKLSLPPFTLVGATTRAGLVSSPLRSRFGQISRLEYYNADQLRSVIQRSAALLKIEL
SDDGAAEIARRSRGTPRIANRLLRRVRDYAIVVGDGHIDAALANYALKKVGVDSVGFDSL
DRMYLSALCEKFGGGPAGLSTLAAAIDEERDTIETVIEPYLLQQGYIQRTPQGRVATQTA
FRHLELPIPHND
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggaatcaaaaatcgcaaagacaagcgccatcgagcccagccagatcgaatcc
tcggcgattgagccgagcacgattgagtcgagcccaatcgccgtctcccaggaggcgcga
aacccctcgcttgagcgcgaggccgcgcccgatgacgaggcgttggaccgcgcgctgcgc
ccgcatacattcggcgatttcgtcgggcagcgcgcgatcaaagagaaccttggcgtgatg
gtcgagtcggcccgcatgcgcaaggcgacgctcgaccatattctattatccgggccgccc
ggcctcggaaagaccacgctcgcccatatcctggcgcgcgagatgggcgcgaccatccac
gtcaccagcggcccggcgctcgagcaaaaaaaggacctcgccggcatcttaagcgcgctc
gaccacggtgatatgctctttatcgacgaggtgcaccggctcaacccggtcatcgaggag
aacctctatccggcgatggaggaccaatatttcgacgtggtggtcggcagcggcccccag
gcgcgcagcatgaagttgtctttgccgcccttcaccctggtcggggcgaccacgcgcgcc
gggctggtctcctcgccgctgcgaagccgcttcggccagatctcgcgcctcgaatattat
aacgccgaccaactgcgcagcgtcattcagcgctcggccgccctgcttaagatcgagctg
agcgacgacggcgccgccgaaatcgcgcgccgaagccgcggcaccccgcgcatcgccaac
cgcctgcttcgccgcgtgcgcgactacgccatcgtggtgggcgacgggcatatcgacgcc
gcgcttgccaattatgcgctcaaaaaagtcggcgttgactcggtgggcttcgacagcctg
gaccgcatgtatttgagcgcgctctgcgagaaattcggcggcggccccgccggcctgagc
accctggccgcggccatcgacgaggagcgcgacaccatcgagacggtcatcgagccgtat
ctgctccaacagggctatatccagcgcacgccccaggggcgagtcgcgacgcagaccgct
tttaggcatcttgaacttccgattccccataacgattga
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