Bradymonas sediminis: DN745_08715
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Entry
DN745_08715 CDS
T05497
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsed
Bradymonas sediminis
Pathway
bsed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN745_08715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsed03019
]
DN745_08715
03009 Ribosome biogenesis [BR:
bsed03009
]
DN745_08715
Enzymes [BR:
bsed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DN745_08715
Messenger RNA biogenesis [BR:
bsed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DN745_08715
Ribosome biogenesis [BR:
bsed03009
]
Prokaryotic type
rRNA helicases
DN745_08715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AWV89414
UniProt:
A0A2Z4FL43
LinkDB
All DBs
Position
2295907..2298195
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AA seq
762 aa
AA seq
DB search
MVETVEKSFEDFFLSEEMLKALRTVGYKRPTPVQAESIPLILAGIDLIVQSHTGSGKTAA
FAVPATDMLEANPGRIEVLVLAPTRELAKQSAAEFERLGQYKELSATAIYGGASYETQLE
ALKTAQIVTATPGRLLDLAKRGDIDLSTLRIFCLDEADEMLSMGFREELNAIVDFLPKER
QSLLFSATVNSEIQALAKGMLYYPEYISLSGDQVAAAAVTHLYYRVAGMGRKRDLVRVIQ
FERPDSAIIFCNTRNDTFEVTEYLQQAGYRAKVLNGDLPQNQREATLAELRNGTVDFIVA
TDVAARGIDITDLTHVINYTLPSSAETYVHRTGRTGRAGKKGRAITLLAPAEMATHFDIM
SLYDIEIEQRQLPTDKEVQQAQAVDRLDSLVSDVMAMKDVSGEATLALATTLLSAHAENP
GAEPELDSVLAKLLALADMVLRDPKIADIVTGRAPLVAPAKAEPKKDAAEKAAPAKTPEA
VEPKEEAAPAKAPTPEASESGRSKRRSNRKSRSKSSSSSRRSSKAHAETKSETKTEAKTE
TESNEPRRRRRRRSRGAKTTTPSSSSVSTVTPEVDTPEEPSASKRRSTGARRRQPVEDAE
ESRGNRSRRRKRSSGGSKSSKSSKRSRGSKSSKSSRGSKSSKRSRGSRSSKSTRDNKRSR
GNKRSRRNERSSGSAASTASTPTFDTSKMYLNVGRDHVEDSKELLEMICYMSGFDTEDFA
DISVQSSYSFVQVLQSYFYDIINAINNQEWKGVSISAEPARK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggtagagaccgtcgagaagtcctttgaagattttttcttgagcgaagagatgctcaag
gccctgcgcaccgtgggctataagcgccccaccccagtccaggcggagtcgattccgctg
atcctggccggcattgatctgatcgtgcaatcgcatacgggttcgggaaaaaccgccgcc
tttgcggtgcccgccaccgatatgctcgaggcgaacccgggccgcatcgaagtcctggtg
ctcgcgcccacgcgcgaattggccaaacagagcgcggcagagttcgagcgccttggtcag
tataaggaattgtcggccaccgcgatttacggcggcgcatcctacgagacccagcttgag
gcgcttaagaccgcccagatcgtcaccgcgacccccgggcgactcctggacctggccaag
cgcggcgatatcgacctgagcaccctgcgcatcttctgcctcgacgaggccgacgaaatg
ctgtcgatgggcttccgcgaggagctcaacgcgatcgtcgacttcctgccgaaggaacgc
cagtcgctgctgttctccgcgacggtcaactccgaaattcaggccctcgccaagggcatg
ctctattatcccgaatatatctcgctgtcgggcgaccaggtcgccgcagccgcggtcacg
cacctctactaccgcgtcgccggcatgggtcgaaaacgcgatctggtgcgcgtgattcaa
ttcgagcgccccgatagcgcgatcattttctgcaacacgcgaaatgacaccttcgaggtc
accgaatacctgcagcaagccggataccgcgcgaaagtgctcaacggcgatctgccgcag
aaccaacgcgaagccacactggcggagctgcgaaacggcaccgtcgacttcatcgtggcc
accgacgtcgccgcgcgcggcatcgacatcaccgacctcacgcacgtgattaactacacg
ctgccgagctcggccgagacctatgttcaccgcaccggtcgcaccggacgcgccggcaaa
aagggacgcgccatcaccctgctcgccccggccgagatggccacgcatttcgacatcatg
tcgctctacgatatcgagatcgagcagcgccaattgccgaccgacaaagaggtccagcag
gcccaggccgtggaccgactcgactcgctggtcagcgacgtcatggcgatgaaagacgtc
tctggtgaagcaaccctcgcgctcgcgaccacactgctgagcgcgcacgccgagaatccg
ggggcggagcccgagcttgactccgtgctcgccaagcttcttgcgctggctgatatggtc
cttcgcgacccgaagatcgccgatatcgtcaccggacgcgcgccgctggttgcgccggca
aaagccgagcccaagaaagacgccgccgaaaaagccgcgcctgcgaagacgcccgaagcc
gtcgagcccaaagaagaagcggcaccggcgaaagccccgacgccagaggcctccgagagc
gggcggtcgaagcgccggtccaaccgcaagagccggtcgaagtcttcgtcctcaagccgt
cgctcgagcaaggcccacgccgaaacgaagtcggaaaccaaaaccgaagcgaagaccgaa
acagagtcgaacgaaccgcgccgtcgccgccgacggcgctccagaggcgcgaagaccacg
accccgtcttcgtcatcagtcagcacggtcaccccggaagtcgacacccccgaggagccg
tcggcgagcaaacgacgctccaccggcgcgcgccgccgccagccggtcgaagacgccgag
gaatcccgcggaaatcgaagccgtcgccgcaagcgaagcagcggcggaagcaagagcagc
aaaagcagcaagcgcagccgcggaagcaagagcagcaagagcagccgcggaagcaagagc
agcaagcgcagccgtgggagccgaagcagcaagagcacccgggacaacaagcgcagccgc
ggcaataagcgtagccgccgcaatgagcgcagctcgggcagcgcggcgtcgaccgcgtcg
acgccgacgtttgacacctcgaagatgtacctcaatgtcggccgcgatcacgtcgaagac
tccaaagagttgctcgaaatgatctgctatatgtccggcttcgacaccgaggacttcgcc
gatatctcggtgcagagcagttatagttttgtacaggtgcttcagtcgtatttttatgac
atcatcaacgcgatcaataaccaggaatggaaaggcgtgagcatcagcgccgagcccgcg
cgcaaataa
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