Bradymonas sediminis: DN745_09910
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Entry
DN745_09910 CDS
T05497
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bsed
Bradymonas sediminis
Pathway
bsed03420
Nucleotide excision repair
bsed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DN745_09910
03430 Mismatch repair
DN745_09910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsed03400
]
DN745_09910
Enzymes [BR:
bsed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DN745_09910
DNA repair and recombination proteins [BR:
bsed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DN745_09910
MMR (mismatch excision repair)
Other MMR factors
DN745_09910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AWV89633
UniProt:
A0A2Z4FL09
LinkDB
All DBs
Position
2613167..2615167
Genome browser
AA seq
666 aa
AA seq
DB search
MKRYTIKKKSRSGAGNIDYDTLLNEQQRAVVTAGAGPMLVIAGAGSGKTHTLTYRVAHLV
DRGVAPENILLLTFTNKSARAMIERVSDLLNINATSLWGGTFHSVGNRILRREATRLGYG
EEYGILDSQDAATLMRACVADAKVGHLEKHFPRGGVLTRIYSYCANTQRTVEEILADQYP
HFEELAESIRRVFRLYQTRKLEMSLMDFDDLLINWKILMQTHPEVLREYAAKFEHILVDE
YQDTNHLQGEIIDLMASIHENLMVVGDDCQSIYAFRGADYRNILEFPQRYERCRVYKLET
NYRSTPEILDLANASIHFNENQFQKTLVSARDAGERPALIKLRGVSQQAEFVCQRILELA
DEGQSLDQMAVLYRSHHHALELQVEMTRAKIPYVVRSGIRFFEQAHIKDVLSYLKFLFNP
RDEISFMRMAGQWRGIGSKRSQDIWMYVQSQPDPMSAITDPKLLGALPKRASASWSDASK
LLGSLRDKRLTSSPSQLIDSILGSKFRDHLQRTYDKPDNRLADLEQLSVYSDSFNDIDHF
LGEISLLSGLSGQEILVGGDKPDEYVTLSSIHQSKGLEWTTVFGLWLSEGQFPGSRAETQ
EEIEEERRLFYVMATRAREELYLCQPMIQQGKSGRRTVLRESQFIEELRYLKDGQPKPFE
EWLVDG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatatacaattaaaaagaagtcgcgctccggcgcgggcaatattgactacgac
acgcttctcaatgagcagcagcgtgcggtcgtgaccgcgggggccgggccgatgctggtc
atcgccggggcggggtccggcaagacgcatacgctgacgtatcgcgtggcccatctggtg
gatcgcggggtcgcgccggagaatatcctgctgctgaccttcaccaataaatcggcgcgc
gcgatgatcgagcgggtcagcgacctgctcaatatcaacgccacctcgctatggggcggg
acctttcatagcgtcggcaaccgcatccttcgccgcgaggcgacccgccttgggtatgga
gaggagtacgggattttggactcccaggacgccgcgaccctgatgcgcgcgtgcgtggcg
gacgccaaggtcggccacctcgagaagcatttcccccgcggcggcgtgctcacccgcatc
tatagctattgtgccaacacccagcgcaccgtcgaagagatactcgccgaccaatacccc
catttcgaggagctggctgagtcgattcgccgggtgtttcgcctctatcagacccgcaag
ctcgagatgtcgctgatggatttcgatgatcttctgatcaattggaaaatcctgatgcag
acccacccggaggtgctgcgcgaatatgccgcgaaattcgagcatattctggtcgacgaa
taccaggacaccaaccacttgcagggcgagattatcgacctgatggcgtcgatccacgag
aacctgatggtcgtgggtgacgattgccagagtatttacgcgtttcgcggggcggattac
cgaaatatcctcgagtttccgcagcgttatgagcgctgccgggtctataaacttgagaca
aattatcgctcgacgcccgagattctcgacctcgccaacgcctccatccacttcaacgag
aatcaattccagaagaccctggtgagcgcgcgcgacgccggcgagcgccctgccctgatc
aagttgcgcggggtgtcacagcaggccgaatttgtgtgccagcgcatcctcgaattagcc
gacgagggccagtcgctcgaccagatggcggtgctgtatcgctcgcatcatcacgccctg
gaattacaggtggagatgacccgggcgaagatcccctatgtggtgcgctcggggattcga
ttcttcgagcaggcccatatcaaagacgtgctgagttatcttaaatttctctttaacccg
cgcgacgaaatcagctttatgcgcatggccggccagtggcgcggcatcgggagcaagcgc
tctcaggatatctggatgtatgtgcagagccagcccgatccgatgagcgctattaccgac
cctaaactgctcggcgcgctgcccaaacgggcgagcgcgtcctggagcgacgcgtccaag
ctgctcggaagtcttcgggataaacgcctgacctcgtcgccgtcccaactcatcgactcg
atacttggcagcaaatttcgcgaccacctacagcgaacttatgacaagcccgacaaccga
ctcgccgacctcgaacagctcagcgtctattcggatagcttcaatgatatcgaccatttt
ctgggcgaaatatcgctgctctcgggcctctcgggacaggagattctggtcgggggtgat
aagcccgatgagtacgtcacgctctcctcaattcaccaatcgaagggattggagtggacg
acggtctttgggctctggctctccgaggggcaattccccggctcacgcgccgagacccag
gaggaaatagaagaggagcggcgactcttctatgtgatggcgacgcgcgcccgcgaggag
ctttatctctgccagccgatgatccaacagggtaaaagcggccggcgcacggtgctgcgg
gaatcgcaatttatcgaggagcttcgctacctcaaagacggacagcccaagcccttcgag
gagtggctggtcgatggataa
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