Bradymonas sediminis: DN745_16485
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Entry
DN745_16485 CDS
T05497
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bsed
Bradymonas sediminis
Pathway
bsed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN745_16485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsed03021
]
DN745_16485
03019 Messenger RNA biogenesis [BR:
bsed03019
]
DN745_16485
Transcription machinery [BR:
bsed03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DN745_16485
Messenger RNA biogenesis [BR:
bsed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DN745_16485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
AAA_22
AAA_25
NTPase_1
Spore_III_AA
AAA_16
AAA_18
Rad17
NB-ARC
AAA_19
ABC_tran
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AWV90830
UniProt:
A0A2Z4FPL1
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All DBs
Position
4364376..4365344
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AA seq
322 aa
AA seq
DB search
MFRTTFKRHQKKKIGMARRRKRRRGSKQPKVNKLKRLTERLADYTPIQPAERIKLETGPK
DITGRLIDLIAPIGKGQRVLVTSPPKAGKTTILQTISRAVHKNHPEIYQVALLIDERPEE
ATDFRRNIPAKVEASTTDSTPEQHVRLAEKVFADALEKLLDGEDVLILLDSITRLARAYN
TTNRSGNGRTLSGGITAGALDRPRQLFGAARNLEEAGSLTIVATALIDTGSRMDDVIFHE
FKGTGNSELVLDRELANRRLFPAVDLAASGTRRELDLMSPVEGKRVPDLRRRLADMSQQE
SLSWFLKRIKRTQNNLELLGSF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcgcacgacattcaaacgacatcaaaaaaagaaaattggtatggcaagacgcaga
aagcgccgacgcggaagtaagcaacccaaagttaataagctcaaacgcttaacagagcgc
ttggctgactataccccgattcaaccggcggagcgcatcaagctggagaccgggcccaag
gatatcaccggcaggctgatcgacctgatcgccccgatcggcaagggccagcgggtcctg
gtgaccagcccgcccaaagcgggcaaaacgaccatcctgcagaccatttcgcgggcggtg
cacaaaaatcaccccgagatctaccaggtcgccctgctgatcgatgagcgcccggaagaa
gcgaccgacttcaggcgcaatatcccggccaaggtcgaagcctcgaccaccgacagcacc
cccgagcagcatgtgcgcctggccgaaaaggtcttcgccgacgcgctcgaaaaattgctc
gacggcgaagacgtcctgatcctgctcgactcgatcacccgcctggcgcgcgcctataat
acgaccaaccgaagcggcaacggccgcacgctctccggcggcatcaccgccggcgcgctg
gaccgccctcgccaattattcggcgccgcgcgcaacctggaagaagccggcagcctgacc
atcgtggcgaccgcgctcatcgacaccggcagccgcatggatgacgtgatcttccacgaa
ttcaaaggcaccggtaactcggagctggtgctcgaccgcgaattggccaaccgccgcctc
ttcccggccgtcgacctcgccgcctccggcacccgtcgcgagcttgacctgatgagcccg
gtcgagggcaagcgcgtccccgatcttcgccgacgcctggccgatatgagccagcaagag
tcgctgagctggttcctcaaacgcatcaagcgcacccagaataacctggagttgctcggc
tcgttctaa
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