KEGG   Bradymonas sediminis: DN745_17815
Entry
DN745_17815       CDS       T05497                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bsed  Bradymonas sediminis
Pathway
bsed03030  DNA replication
bsed03410  Base excision repair
bsed03420  Nucleotide excision repair
bsed03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DN745_17815
   03410 Base excision repair
    DN745_17815
   03420 Nucleotide excision repair
    DN745_17815
   03440 Homologous recombination
    DN745_17815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsed03032]
    DN745_17815
   03400 DNA repair and recombination proteins [BR:bsed03400]
    DN745_17815
Enzymes [BR:bsed01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DN745_17815
DNA replication proteins [BR:bsed03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DN745_17815
DNA repair and recombination proteins [BR:bsed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DN745_17815
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DN745_17815
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1
Other DBs
NCBI-ProteinID: AWV91087
UniProt: A0A2Z4FPX7
LinkDB
Position
4725709..4728531
AA seq 940 aa
MSENKTLYIVDGSSYIFRAFYAIRSLSTAAGFPTNAIYGFTQMLMRLLRDENPEYIAMTF
DVSDVDVPNFRKVLYDDYKANRSAMPDELREQMPYFSKVVEALHIPIKTQVGVEADDVIA
TLTRQARAEGFEVCIVSADKDLMQLLADEVRMLDTMRDKTYTPEEVQERFNVTPDKVKYV
LALAGDSSDNIPGVPGIGEVTGGRLIEEFGDLENLLANIDKVSGKKRKENLENFADQARL
SLELVTLRDDCDVEFQPEDLVLSKPNFAELDALFTELEFGSPLRDVRKWMEAKGWLEPEP
EKPKKAKKAKKKPSDQLDFFSSAAGANSAAAEQNDHTNSGKNYRAIRSVEAFEEVLAKLA
EVDRFAFDLETTSLNPLDAQICGMSFAWQPNDAVYIPCAHSYEGVGEQLDLDYILEKLRP
FLESEDAKKVVGQHLKYEWLVLQKYDIDLRAILYDTMLMSYLLDPSSNKHGMDAMAMQWL
NYQTISYEDVAGKGKSQVTFDKVHLDAAVPYGAEDADITLMLCNLLEPMLIEAGLKEIHD
TLEVPLTRVLAIMEAEGIQIDPEMLGVLSVEFDQELGELQDQIDELSGGPTNPNSPKQLR
EVLFERLGLPVKKRTKTGPSTAASVLEELSELHELPALILEYRSFSKLKGTYVDALPLLI
REDTGRIHTSFNQAVAATGRLSSSNPNLQNIPMRTARGRQIRKAFVPAPGYQLLVADYSQ
IELRIVAHMSQDPLLLDAYKRGADIHRLTASQIFDVDFEEVTSAQRGAGKTINFGVLYGM
GARRLAASLRISQGEATQYIDNYFERYAGVSAFFDKLVADATHSGYAETMFGRKRQIADM
GTLGRREQAFAERVAINTPIQGSAADIIKFAMVNLQAKIEAEELPMRMLLQVHDELVFEV
EDAFVDAAKTIVREAMEGVCELDVPLLVDLGCGDNWLDAK
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgtctgagaataaaacgctctatattgtcgacggttcctcctatatattccgcgcgttt
tacgcgatccggagcttgtcgaccgccgcaggttttcccaccaacgcgatttacggcttc
actcagatgctgatgcgccttttgcgcgatgagaaccccgaatatatcgcgatgaccttc
gacgtgtcggacgtcgatgtgccgaattttcgcaaagttttatacgatgattataaggcg
aatcgctcggcgatgcccgacgagctgcgcgagcaaatgccatattttagcaaggtggtt
gaggcgctgcatatcccgattaaaacccaggttggcgtggaggccgacgatgtcatcgcg
accctgacccgccaggcgcgcgccgagggctttgaggtctgcatcgtcagcgccgacaag
gacctgatgcaacttctggccgacgaagtccgcatgctcgacaccatgcgcgacaagacc
tacacccccgaagaggtccaggagcgcttcaacgtcacgcccgataaggtcaaatatgtg
ctcgctttggctggcgatagctccgacaatatcccgggcgtgccgggcatcggcgaggtc
accggcgggcggttgatcgaggagttcggcgacctggagaacctgctggccaatatcgac
aaggtcagcggaaagaagcgcaaggagaacctggagaacttcgccgaccaggcgcgcctg
tcgctggagttggtgaccttgcgcgatgattgcgacgtggagtttcagcccgaagacctg
gtgctgagcaagccgaatttcgccgagctggacgccctctttaccgagcttgagttcggc
tcgccgcttcgggacgtgcgcaaatggatggaggcaaagggctggctcgagccggagccg
gagaaacccaaaaaggccaaaaaagccaagaaaaagccgtcagaccagctcgattttttc
agcagcgccgccggcgccaacagcgccgccgcggagcaaaatgaccacaccaatagcggc
aaaaactaccgcgccatccgaagcgtcgaggccttcgaagaagtcctcgccaagctcgcc
gaagtcgaccgcttcgccttcgatttggagaccacgagcctcaacccgctggacgcgcag
atctgcggcatgagcttcgcctggcagcccaacgacgcggtctatatcccgtgcgcccat
tcttatgagggcgtcggcgagcagctggacctggattatatcctggagaaattgcggccg
tttcttgagagcgaggacgccaaaaaggtcgtcggccagcaccttaaatacgaatggttg
gtgcttcaaaaatacgacatcgacctgcgcgccatcctctatgacaccatgcttatgagt
tatctgctcgacccgagcagcaataaacatggcatggacgcgatggccatgcagtggctc
aattatcagaccatcagctacgaggacgtcgccggaaagggcaaaagccaggtcaccttc
gacaaggtgcacctggacgccgcggtcccctacggcgccgaagacgccgacatcacgctg
atgctgtgcaacctgctcgagccgatgttgatcgaggcggggctcaaagaaatccacgac
acgcttgaggtgccgctcacccgtgtgctggcgatcatggaggccgagggcatccagatc
gacccggagatgctcggtgttctgagcgtcgagttcgaccaggagctcggcgagctgcag
gaccagatcgacgagctctcgggcgggccgaccaacccgaatagccccaagcaattgcgc
gaagtgctctttgagcgcctcggcctgccggtcaaaaaacgcaccaagaccggcccctcg
accgcggcgagtgtcctcgaagagctgagcgaattgcatgaattgccggcgcttatcctg
gagtaccgctccttctccaagctcaaaggcacctatgtcgacgcgctgccgctgctgatt
cgcgaggacaccgggcgcatccacaccagcttcaatcaggcggtggcggcgaccggacgg
ctgtcttcgtcgaacccgaacttgcagaatatcccgatgcgcaccgcccgcggccgccag
atccgcaaggcgtttgtgccggcgccgggctatcagttattggtggcggactattcgcag
atcgagcttcgtatcgtggcgcatatgtcccaggacccgctgcttttggacgcgtataaa
cgcggcgcggatatccaccgcctcaccgcctcgcagatcttcgacgttgattttgaagag
gtcacctcggcccagcgcggtgccggaaagacgattaatttcggggtgttatacggcatg
ggtgcgcgccggctcgccgcaagcctgcgcatctcgcagggcgaggcgacgcaatatatc
gacaattattttgagcgctacgccggggtcagcgcgttcttcgacaagctggtcgccgac
gccacccacagcggctacgccgagacgatgtttgggcgaaaacgccagatcgccgatatg
gggacgctgggtcggcgcgagcaggcattcgccgagcgcgtcgccatcaatacaccgatt
cagggcagcgccgccgatatcattaaattcgcgatggtgaatttacaggccaagatcgag
gccgaggagttgccgatgcgcatgctccttcaggtgcacgatgagctcgtattcgaggtc
gaggatgccttcgtcgacgcggccaagacgatcgtgcgggaggcgatggaaggcgtgtgc
gagctggacgtgccgctgctggtcgacctcgggtgcggcgacaattggctcgacgccaaa
taa

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