Bradymonas sediminis: DN745_18410
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Entry
DN745_18410 CDS
T05497
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bsed
Bradymonas sediminis
Pathway
bsed00260
Glycine, serine and threonine metabolism
bsed00460
Cyanoamino acid metabolism
bsed00630
Glyoxylate and dicarboxylate metabolism
bsed00670
One carbon pool by folate
bsed00680
Methane metabolism
bsed01100
Metabolic pathways
bsed01110
Biosynthesis of secondary metabolites
bsed01120
Microbial metabolism in diverse environments
bsed01200
Carbon metabolism
bsed01230
Biosynthesis of amino acids
bsed01240
Biosynthesis of cofactors
bsed04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bsed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DN745_18410 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DN745_18410 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DN745_18410 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DN745_18410 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DN745_18410 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DN745_18410 (glyA)
Enzymes [BR:
bsed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DN745_18410 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AWV91191
UniProt:
A0A2Z4FQ42
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All DBs
Position
complement(4857218..4858471)
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AA seq
417 aa
AA seq
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MSDLYPEMDALKSSDPDVYAIIRDEEDRQARTIRLIASENYTSRAIMEATGSVLTNKYSE
GYPGRRYYEGQEHMDRVENLARDRGKELFGAEHVNVQPYSGSPANLEAYYALCEVGDPIL
GMGLPFGGHLTHGWKVNFSGRFYDAHHYGVDPDTHLIDFAEVRKIAREVKPKVIFCGGSA
YPREIDFDKFGEIAEEVGAHLVADIAHIAGLIAGGQHPSPIEAADVVSSTTHKTLRGPRG
GLLMCKKKFAKDIDRAVFPALQGGPHMNTIAGVAIAFKEAMRPEFKTYAADIIENARAMA
DAFVEKGYTLVSGGTDNHLLLVDVTARGSTGKIASTAMAQAGIVCNANSIPFDPRSPFDP
SGIRIGTAAVTTRGMKPAQMRQIVAWTDDAINHADDPARLAAIRAEVDAMCGEFPVP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctgtatcccgagatggacgcattaaaatcgagcgaccccgacgtctacgcg
ataatccgcgacgaagaagaccgccaggcgcgcaccatccgtctgatcgccagcgagaat
tatacctcgcgcgcgatcatggaagcgaccgggtcggtgctgaccaataaatatagcgaa
ggctatcccgggcgccgttattacgagggccaggagcatatggaccgggtcgagaacctc
gcgcgcgaccgcggcaaggagctcttcggcgccgagcacgtcaacgtccagccctactcg
ggctccccggccaacctcgaggcgtattacgccttatgcgaggtcggcgacccgatcctg
ggcatgggcctgccctttggcgggcatctcacccacggctggaaggtcaacttctcaggg
cgcttctatgacgcgcaccactacggcgtggacccggacacccatctgatcgacttcgcc
gaggtgcgaaagatcgcccgcgaggtcaaacccaaggtcatcttctgcggcggctccgcc
tacccgcgcgagatcgacttcgacaaattcggcgaaattgccgaggaagtcggggcccac
ctggtggccgatatcgcgcatatcgccgggctgatcgccggcggccagcaccccagcccc
atcgaggcggccgacgtggtctcctcgaccacgcataaaaccctgcgcggcccgcgcggg
ggcttgttgatgtgcaaaaagaaattcgccaaagatatcgaccgcgccgtcttccccgcc
ctgcaaggcgggccgcatatgaatacgatcgccggcgtcgccatcgcctttaaagaggcg
atgcggcccgagtttaagacctacgcggccgatatcatcgagaacgcccgcgccatggcc
gacgccttcgtcgagaagggctataccctggtcagcggcggcaccgacaaccatcttttg
ctcgtcgacgtcacggcgcgcggcagcaccggcaagatcgcgtcgaccgccatggcccag
gccggcatcgtctgcaacgccaactcgatccccttcgacccacgctcgccatttgacccc
tcgggcatccgcatcggcaccgccgcggtgaccacccgcggcatgaaacccgcgcagatg
cgccagatcgtggcgtggaccgacgacgccatcaatcacgccgacgaccccgcccgcctc
gccgcgattcgcgccgaggtcgacgcgatgtgcggggaattcccggtgccctga
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