Bradyrhizobium sediminis: KMZ68_01865
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Entry
KMZ68_01865 CDS
T08500
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bsei
Bradyrhizobium sediminis
Brite
KEGG Orthology (KO) [BR:
bsei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsei03016
]
KMZ68_01865 (thpR)
Enzymes [BR:
bsei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KMZ68_01865 (thpR)
Transfer RNA biogenesis [BR:
bsei03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KMZ68_01865 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QWG18670
UniProt:
A0A975NPL6
LinkDB
All DBs
Position
366566..367102
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AA seq
178 aa
AA seq
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MPRLFTGLEIPAEIGQTLSSLRGGLPGARWIDPENYHVTLRFIGDIDGVAANEIASLLVR
INRKPFEVALQGLSSFGGKKPRAVVASVVPSRPLIELQAELERLMQRIGLDPEGRKFTPH
VTLARLRDASNQDVADYLSVRGYFPTKVFTASRFVLFSSRASTGGGPYVVEDSYALSA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgtttactggactggaaattccggccgagatcggccagacgctttccagc
ctgcgaggcggccttccgggcgcccgctggatcgaccccgaaaattatcacgtcaccttg
cgcttcatcggcgatatcgatggcgtcgcggccaacgagatcgcctccctgctggttcgg
atcaaccgcaagccgttcgaagtagcgctgcagggcctgtcgagtttcggcggcaagaag
ccgcgcgcggtggtcgcctccgtggtgccgagccggccgctgatcgaactgcaggcggaa
ctggaacggctgatgcagcgcatcgggctcgatcccgaaggccgcaaattcacaccgcat
gtgacgctggcgcggctgcgcgatgcctccaaccaggatgtcgcggattatctctcggtg
cgcggctatttcccgaccaaggtattcacggcttcgcgcttcgtgctgttctcgtcgcgc
gcttccaccggcggcgggccctatgtggttgaggattcctacgcgctgagcgcgtga
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