Bradyrhizobium sediminis: KMZ68_14885
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Entry
KMZ68_14885 CDS
T08500
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bsei
Bradyrhizobium sediminis
Pathway
bsei03030
DNA replication
bsei03430
Mismatch repair
bsei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KMZ68_14885 (dnaE)
03430 Mismatch repair
KMZ68_14885 (dnaE)
03440 Homologous recombination
KMZ68_14885 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsei03032
]
KMZ68_14885 (dnaE)
03400 DNA repair and recombination proteins [BR:
bsei03400
]
KMZ68_14885 (dnaE)
Enzymes [BR:
bsei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KMZ68_14885 (dnaE)
DNA replication proteins [BR:
bsei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KMZ68_14885 (dnaE)
DNA repair and recombination proteins [BR:
bsei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KMZ68_14885 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
DUF6374
Motif
Other DBs
NCBI-ProteinID:
QWG16315
UniProt:
A0A975NK58
LinkDB
All DBs
Position
complement(3124791..3128303)
Genome browser
AA seq
1170 aa
AA seq
DB search
MSNAGFVHLHVHSAYSLLKGSIKIQKLGELAKADRQPALALTDTDNMFGALEFSDKMAGY
GIQPIIGCELVIDFGDQDPNARNALAAGPSRIVLLAARERGYRSLMRLNSRAFLETPIHQ
APHIKFEWLQGDAEDLIALTGGPDGPISLALGADHAALAATRCDRLASLFGDRLYVELQR
HGIDKERRTEAGLIDLAYAKGLPLVATNEPYFAATDDYEAHDALLCIAGGRLIAETDREQ
LTPDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPRTRKPILPRFTVGASSNAAEAE
SEEAAELRRQAEQGLGNRLKVHGLAPGQTEESYRARLAFELDVITRMNYAGYFLIVSDFI
KWAKSEGIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQ
DRRGEVIDYVQRRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPA
APVTLAAAIASEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVISDRPLSELV
PLYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKQRGVEVDLATLPL
DDAKSYQMLARGDVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMANIPTYCA
RKHGDEEPEYLHPMLEPILKETFGVIIYQEQVMQIAQVMAGYSLGDADLLRRAMGKKIRS
EMEQQRAIFVAGAMKNNVTKGQADTIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHY
PVEFLAASMTLDLSNTDKLSEFRAEAQRLGIKVEAPSVNRSGATFEVSDGTIYYALAGLK
GVGHQAVELIVEARKDGLFTSLADFAARVNPRAINKRVIESLAAAGAFDALDSNRARVFA
GAEAILSACQRSHEAATMGQNDMFGGAADAPTIMLPQIEPWLPAERLRREYDAIGFFLSG
HPLDDYATVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSDP
TGHFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDAAAAKTQKGL
RIFVRDTRPLESIARRLQMPEAAPPGGPARGLQAKPAPAPAGGADGDVSLVMMLDLETEV
EMKLPGRFKVSPQIAGAIKAVSGVVDVQQL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgccggatttgtccatctccacgtccattccgcctattcgctgctgaagggg
tcgatcaagatccagaagctcggcgaactggcgaaagcggaccgccagccggcgctggcg
ctgaccgacaccgacaacatgttcggggcgctggaattctccgacaagatggccggctac
ggcatccagccgatcatcggctgtgagctggtgatcgatttcggcgaccaggacccgaac
gcgcgcaatgcgcttgccgcaggaccatcgcggatcgtgctgctggcggcgcgcgagcgc
ggctatcgcagcctgatgcggctgaactcgcgggcgttcctggagacgccaatccatcag
gccccgcacatcaagttcgaatggctgcagggcgacgccgaggacctgatcgcgctgacc
ggcggtcccgacggcccgatctcgctggcgctcggcgccgatcacgcagcactggcggcc
acccgctgcgaccggctggcgagcctgttcggcgaccggctctacgtcgaattgcagcgc
cacggcatcgacaaggagcgccgcaccgaggccggcctgatcgatctggcctacgccaag
ggcctgccgctggtcgcgaccaacgagccgtatttcgcggccaccgacgactatgaagcc
catgacgcgcttttgtgcatcgccggcggacgtctgatcgccgaaaccgatcgcgagcag
ctcaccccggaccaccgcttcaagacccgcgccgaaatggcggtgctgttcgccgatatt
ccggaagcgctggcatcgaccgtcgagatcgccgagcgctgttcgttccgcccgaggacg
cgcaagccgatcctgccgcgcttcacggtcggcgcgagttcgaatgccgccgaagcggag
agcgaggaggcggccgagctgcgccgtcaggccgagcagggcctcggcaaccggctcaag
gtccatggcctcgcgccgggccagaccgaggaaagctatcgcgcccggctcgccttcgaa
ctcgatgtcatcacccgcatgaactatgcgggctacttcctgatcgtttccgacttcatc
aaatgggcgaagtcggagggcattccggtcggaccgggccgcggctccggagcgggctcg
ctggtcgcctatgccctgaccatcaccgatctcgatccgatccggttcggcctcctgttc
gagcgcttcctcaatccggaacgcgtgtcgatgcccgacttcgacatcgacttctgccag
gaccggcgcggcgaggtcatcgactatgttcagcgccgctacggccgcgatcaggtcgcc
cagatcatcaccttcggcaccttgcaggcgcgcggcgtgctgcgcgacgtcgggcgcgtg
ttgcagatgccctatgggcaggtcgacaaactcacaaaacttgtgccgcaaaatcccgcc
gcaccggtgacgctggcggcggcgatcgcgagcgaaccgaagctgcaggcgttccgcgac
gaggatccggtggtggcgcgcgccttcgacatcgcgcagcgattggaggggctgacccgg
cacgcttccacccacgccgcgggcatcgtgatatcggaccggcccctgagcgagctggtg
ccgctctaccgcgatccgaaatccgacatgccggtgacccagttcaacatgaaatgggtc
gaacctgcagggctggtgaagttcgacttcctcggcctgaagacgctgacggtgctcgat
gtcgccgtgaagctgctgaagcagcgcggcgtcgaggtcgatctcgcgaccctgccgctc
gacgacgccaagagctaccagatgctggcgcgcggcgacgtggtcggcgtgttccaggtt
gaaagccagggcatgcggcgggcgctggtcgacatgcggcccgaccgtttcgaggacatc
atcgcgctggtggcgctctaccgcccgggtccgatggcgaacatcccgacctattgcgcg
cgcaagcacggcgacgaagagccggaataccttcacccgatgctcgagccgatcctgaag
gagaccttcggcgtcatcatctaccaggaacaggtgatgcagatcgcgcaggtcatggcc
ggctattcgctcggcgacgccgacctgctgcgccgcgcgatgggcaagaagatccgctcg
gagatggaacagcagcgcgcgatcttcgtcgccggcgcgatgaagaacaatgtgacgaaa
ggccaggccgacaccatcttcgaactgctggcgaagttcgccgactacggcttcaacaag
agccacgccgccgcctacgcgctggtgtcgtatcacaccgcctacatgaaggcgcattac
ccggtcgagttcctggcggcgtcgatgacactcgatctctccaataccgacaagctcagc
gagtttcgtgccgaagcgcagcggctcggcatcaaggtcgaggcgccctcggtcaatcgc
tccggcgccaccttcgaggtcagcgacggcaccatctattacgcgctagcgggcctgaag
ggcgtcggccaccaggcggtcgaactgatcgtcgaggcgcgcaaggacggcctgttcacc
tcgctggccgattttgccgcgcgggtgaatccgcgcgcgatcaacaagcgcgtgatcgag
agcctggctgcggccggcgccttcgacgcgctggattccaatcgcgcgcgggtgttcgcg
ggcgcggaggcgatcctcagcgcgtgccagcgcagccacgaggccgcgaccatggggcag
aacgacatgttcggaggcgccgccgacgcgccgaccatcatgctgccgcagatcgaaccc
tggctgccggccgaacggctgcggcgcgaatatgacgccatcggcttcttcctctccggc
catccgctcgacgactacgccacggtgttgaagcggctgcgggtgcagtcctgggcggaa
ttttcccgcgcggtcaaaaccggcgccaccgccggcaaggttgccgccaccgtggtgtcg
cgcatggagcggcggaccaagaccggcaacaagatgggcatcatggggctgtcggatccg
accggccatttcgaagcggtgctgttttccgaggggctcgcgcagtatcgcgacgtgctg
gagccaggggctgcggtgctgctgcagctcggtgccgagctgcagggcgaagacgtgcgg
gcgagggtgcttcacgccgagccgctcgacgccgccgcggccaagacccagaagggtctt
cgcattttcgtccgcgacacccggccgctcgagtcgatcgccaggcggctgcagatgccc
gaggccgcgccgccgggcggaccggcccgcggccttcaggccaaaccggctcccgcgccc
gcgggcggcgccgacggcgacgtctcgctggtgatgatgctcgacctcgaaaccgaggtg
gaaatgaagcttcccggccgtttcaaggtctcgccacagatcgcgggcgcaatcaaggcg
gtttcgggcgtggtggacgtgcagcagttgtag
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