Bradyrhizobium sediminis: KMZ68_14980
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Entry
KMZ68_14980 CDS
T08500
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bsei
Bradyrhizobium sediminis
Pathway
bsei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KMZ68_14980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsei03019
]
KMZ68_14980
Messenger RNA biogenesis [BR:
bsei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KMZ68_14980
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
RNase_J_C
Lactamase_B
Lactamase_B_2
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QWG16331
UniProt:
A0A975NKR3
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All DBs
Position
complement(3145799..3147469)
Genome browser
AA seq
556 aa
AA seq
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MARPDELTFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDI
RFLEKERKNLVGLVLTHAHEDHFGAIIDLWPKLKCPIYATQFSASLFEAKCNSERNPPKI
PVTVVPSGGRIDLGPFNVEFIPVAHSIPESHALAIHTSAGTVLHTGDWKIDPTPIIGKPT
DERRLRELGDAGVLALIGDSTNAVREGRSPSEAEVAKTITELVKNAKGRVAVTTFASNVA
RLRAVADAAKAAGREVVVVGRAMERVVQVARETGFLDGVQNFRGADLYGHFPPDKVLAIC
TGSQGEPRAALSRIANDDHPQVTLNKGDCVIFSSRTIPGNEKAVGAIINGLVTQGIEVIT
DRTDLVHVSGHPRRDELRDMISWVRPQLLIPVHGEALHLSEHAKLARAAGVPKVLICRNG
DLVKLGPGEPAIIDELPSGRLYKDGSILEESKSRAVVERKKLAFAGCAFVAVAVTEKGEL
ADDPEVDLVGIPEKNTAGEIIDEIVFDTVVSTVEGLPRARRRDPDAMAESVRRAVRATIN
QHWGKKPLCYVHVLTV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggccggatgaactgacctttgcgccgctcggcggcgtcggcgagatcggcatg
aacctgtcgatctacggcctcggtaaccgccaccagcgcagctggctcgcggtcgacctc
ggcgtatccttcggtgacgaggaacatctgccggggatcgatctcatcatgcccgatatc
cgctttctggaaaaagagcggaagaacctcgtcggcctggtgctgacccacgcccatgaa
gatcatttcggcgccatcatcgacctgtggccgaaactgaagtgcccgatctacgcgacc
caattcagcgcatcgctgttcgaggccaagtgcaattccgagcgcaacccgccgaaaatt
ccggtgacggtggtgccgtctggcgggcggatcgatctcgggccgttcaatgtcgagttc
attccggtggcgcattcgattccggaatcccacgcgctggccatccacacctccgccggc
acggtgctgcacaccggcgactggaagatcgatccgacccctatcatcggcaagccgacc
gacgagcggcggctgcgcgaactcggtgacgccggcgtgctggcgctgatcggcgattcc
accaacgcggtgcgggaagggcgctcgccgtcggaggccgaagtcgccaagaccatcacc
gaactggtaaagaacgccaagggccgggtcgccgtgaccacctttgcgtccaacgtcgca
cggctgcgcgcggtggcggacgccgccaaggccgccggccgcgaggtggtggtggtcggc
cgcgccatggagcgcgtggtgcaggtggcgcgcgagaccggttttctcgacggcgtgcag
aatttccgcggcgccgatctctacggccactttccgccggacaaggtgctggcgatctgc
acgggaagccagggcgagccgcgcgcggcgctgtcgcgcatcgccaatgacgatcatccg
caggtcacgctgaacaagggcgactgcgtgatcttttcctcgcgcaccattcccggcaac
gagaaggcggtcggcgccatcatcaacggcctggtgacgcagggtatcgaggtcatcacc
gaccgcaccgatctcgtccacgtgtcgggccatccgcgccgcgacgaattgcgtgacatg
atttcttgggtgcgtccgcaactcctgatccccgtccatggcgaggcgctgcatctgtcc
gagcacgccaagctggcgcgtgccgccggcgtgcccaaggtcctgatctgccgcaacggc
gatctggtcaagctcgggcccggggagcccgccatcatcgatgaattgccctcggggcgg
ctctacaaggacggctcgatcctcgaggagtccaagtcgcgcgcggtcgtcgaacggaag
aaactggcctttgccggctgcgccttcgtggcggtcgcggtgaccgaaaagggcgaactg
gccgacgatcccgaggttgatctggtcggaatccccgaaaagaatactgccggagagatc
atcgacgagatcgtgttcgacaccgtggtgtcgacggtcgagggcctgccgcgggcgcgg
cgccgcgaccccgacgcgatggcggagtcggtacgtcgggcggtgcgtgccacgatcaac
cagcattggggcaagaaacccctgtgctacgttcacgttctgacggtgtag
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