KEGG   Bradyrhizobium sediminis: KMZ68_14980
Entry
KMZ68_14980       CDS       T08500                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bsei  Bradyrhizobium sediminis
Pathway
bsei03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsei00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KMZ68_14980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsei03019]
    KMZ68_14980
Messenger RNA biogenesis [BR:bsei03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KMZ68_14980
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL RNase_J_C Lactamase_B Lactamase_B_2 Mur_ligase_C
Other DBs
NCBI-ProteinID: QWG16331
UniProt: A0A975NKR3
LinkDB
Position
complement(3145799..3147469)
AA seq 556 aa
MARPDELTFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDI
RFLEKERKNLVGLVLTHAHEDHFGAIIDLWPKLKCPIYATQFSASLFEAKCNSERNPPKI
PVTVVPSGGRIDLGPFNVEFIPVAHSIPESHALAIHTSAGTVLHTGDWKIDPTPIIGKPT
DERRLRELGDAGVLALIGDSTNAVREGRSPSEAEVAKTITELVKNAKGRVAVTTFASNVA
RLRAVADAAKAAGREVVVVGRAMERVVQVARETGFLDGVQNFRGADLYGHFPPDKVLAIC
TGSQGEPRAALSRIANDDHPQVTLNKGDCVIFSSRTIPGNEKAVGAIINGLVTQGIEVIT
DRTDLVHVSGHPRRDELRDMISWVRPQLLIPVHGEALHLSEHAKLARAAGVPKVLICRNG
DLVKLGPGEPAIIDELPSGRLYKDGSILEESKSRAVVERKKLAFAGCAFVAVAVTEKGEL
ADDPEVDLVGIPEKNTAGEIIDEIVFDTVVSTVEGLPRARRRDPDAMAESVRRAVRATIN
QHWGKKPLCYVHVLTV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcgcggccggatgaactgacctttgcgccgctcggcggcgtcggcgagatcggcatg
aacctgtcgatctacggcctcggtaaccgccaccagcgcagctggctcgcggtcgacctc
ggcgtatccttcggtgacgaggaacatctgccggggatcgatctcatcatgcccgatatc
cgctttctggaaaaagagcggaagaacctcgtcggcctggtgctgacccacgcccatgaa
gatcatttcggcgccatcatcgacctgtggccgaaactgaagtgcccgatctacgcgacc
caattcagcgcatcgctgttcgaggccaagtgcaattccgagcgcaacccgccgaaaatt
ccggtgacggtggtgccgtctggcgggcggatcgatctcgggccgttcaatgtcgagttc
attccggtggcgcattcgattccggaatcccacgcgctggccatccacacctccgccggc
acggtgctgcacaccggcgactggaagatcgatccgacccctatcatcggcaagccgacc
gacgagcggcggctgcgcgaactcggtgacgccggcgtgctggcgctgatcggcgattcc
accaacgcggtgcgggaagggcgctcgccgtcggaggccgaagtcgccaagaccatcacc
gaactggtaaagaacgccaagggccgggtcgccgtgaccacctttgcgtccaacgtcgca
cggctgcgcgcggtggcggacgccgccaaggccgccggccgcgaggtggtggtggtcggc
cgcgccatggagcgcgtggtgcaggtggcgcgcgagaccggttttctcgacggcgtgcag
aatttccgcggcgccgatctctacggccactttccgccggacaaggtgctggcgatctgc
acgggaagccagggcgagccgcgcgcggcgctgtcgcgcatcgccaatgacgatcatccg
caggtcacgctgaacaagggcgactgcgtgatcttttcctcgcgcaccattcccggcaac
gagaaggcggtcggcgccatcatcaacggcctggtgacgcagggtatcgaggtcatcacc
gaccgcaccgatctcgtccacgtgtcgggccatccgcgccgcgacgaattgcgtgacatg
atttcttgggtgcgtccgcaactcctgatccccgtccatggcgaggcgctgcatctgtcc
gagcacgccaagctggcgcgtgccgccggcgtgcccaaggtcctgatctgccgcaacggc
gatctggtcaagctcgggcccggggagcccgccatcatcgatgaattgccctcggggcgg
ctctacaaggacggctcgatcctcgaggagtccaagtcgcgcgcggtcgtcgaacggaag
aaactggcctttgccggctgcgccttcgtggcggtcgcggtgaccgaaaagggcgaactg
gccgacgatcccgaggttgatctggtcggaatccccgaaaagaatactgccggagagatc
atcgacgagatcgtgttcgacaccgtggtgtcgacggtcgagggcctgccgcgggcgcgg
cgccgcgaccccgacgcgatggcggagtcggtacgtcgggcggtgcgtgccacgatcaac
cagcattggggcaagaaacccctgtgctacgttcacgttctgacggtgtag

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