Bradyrhizobium sediminis: KMZ68_23670
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Entry
KMZ68_23670 CDS
T08500
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bsei
Bradyrhizobium sediminis
Pathway
bsei00061
Fatty acid biosynthesis
bsei00071
Fatty acid degradation
bsei01100
Metabolic pathways
bsei01212
Fatty acid metabolism
bsei02024
Quorum sensing
bsei04146
Peroxisome
Module
bsei_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bsei00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KMZ68_23670 (pimA)
00071 Fatty acid degradation
KMZ68_23670 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KMZ68_23670 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KMZ68_23670 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bsei01004
]
KMZ68_23670 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bsei04147
]
KMZ68_23670 (pimA)
Enzymes [BR:
bsei01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KMZ68_23670 (pimA)
Lipid biosynthesis proteins [BR:
bsei01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KMZ68_23670 (pimA)
Exosome [BR:
bsei04147
]
Exosomal proteins
Exosomal proteins of breast milk
KMZ68_23670 (pimA)
Exosomal proteins of breast cancer cells
KMZ68_23670 (pimA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QWG17914
UniProt:
A0A975NPV8
LinkDB
All DBs
Position
complement(4954920..4956599)
Genome browser
AA seq
559 aa
AA seq
DB search
MTHPGEQFYPQGVHWDDPIARGTLPDLLSHAAAEYGARPAIEFRDRPISYTELEAKVEVA
AAAFLRAGYGRDNSVALFLGNTPDHPVNFFGALKAGARIVHLSPLDGEIALSHKLSDSGA
RVLVTSNLQALLPTALKFLDKGLLDRLIVCEDDDWGKAGTPQTPLPANPAIVTYRQFVDG
ATRPAQWPQIAVDDVALLQYTGGTTGLPKGAMLSHGNLTSAVSVYDVWGKTARAERNAIE
RVICVLPLFHIFALTVVLLSSLRRGNLISLHQRFDVEAVMRDIEVKRATAFPGVPTMWIA
IAALPDLDKRDLSSLVSCGSGGAPLPVEVARIFERKVGMKLKSGWGMTETCSPGTGHPKE
GPDKPGSIGLMLPGIEMDVVALDDPKKILQPGEVGEIRIRGPNVTKGYWNKPKETAEAFV
GDRFLTGDIGYMDPDGYFYLVDRKKDMIISGGFNVYPQMIEQAIYTHPAVHEVIVIGIPD
DYRGEAAKAFIKLRDGAAPFTLDELKALLAGKLGKHEIPAALEFVDELPRTPVGKLSRHE
LRNRQPAPGKQPQLVSGSR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccccggcgaacagttctatccgcaaggcgtccactgggacgatccgatcgcg
cgcgggacgctgcctgacctgctgtcgcacgcggcggcggaatacggcgcgcggccggca
atcgaattccgcgaccgtccgatcagctacaccgagctcgaagccaaggtcgaggtcgcg
gccgcggcgttcctgcgcgccggctacggccgggacaattcggtcgcgctgttcctcggc
aacacgcccgatcaccccgtcaacttcttcggcgcgctgaaggccggcgcccgcatcgtg
catctcagccccctcgacggcgagatcgcgctgtcgcacaagctcagcgattccggcgcg
cgggtgctggtcaccagcaatcttcaggcgctgttgccgaccgcgctgaaattcctcgac
aagggtctgctcgaccgcctgatcgtctgcgaggacgacgactggggcaaggccggcacg
ccgcagacgccgctgcccgccaatcccgccatcgtcacctaccgtcagttcgtcgacggc
gcgaccaggccggcgcagtggccgcagatcgcggtcgatgacgttgcactgctgcaatat
accggcggcaccaccgggctgcccaagggcgccatgctcagccacggcaacctgacctcg
gcggtttcggtctacgacgtctggggcaagacggcgcgcgccgagcgcaacgccatcgag
cgcgtgatctgcgtgctgccgctgtttcatatctttgcgctgacggtggtgctgctgtcc
tcgctccggcgcggcaatctgatctcgctgcatcagcgcttcgacgtcgaggccgtgatg
cgcgacatcgaggtcaagcgcgccactgccttccccggcgtgccgacgatgtggatcgcg
atcgccgcgcttccggatctcgacaagcgcgatctgtcgtcgctggtgagctgcggctcg
ggcggcgcgccgctgccggtcgaagtcgccaggatattcgagcgcaaggtcggcatgaag
ctgaagagcggctggggcatgaccgagacctgctcgcccggcaccggccatcccaaggaa
ggcccggacaagccgggctcgatcgggctgatgctgcccggcatcgaaatggacgtggtc
gcgctcgacgatcccaagaaaattctgcagccgggcgaagtcggcgaaatccgcatccgc
gggccgaacgtgaccaagggttactggaacaagccaaaggaaaccgccgaggccttcgtc
ggcgaccgcttcctcaccggcgacatcggctacatggatccggatggctatttctatctg
gtcgaccgcaagaaggacatgatcatctccggcggcttcaacgtctatccgcagatgatc
gagcaggcgatctacactcaccccgcggtgcatgaagtgatcgtgatcggcattcccgac
gattatcgcggcgaggcggccaaggccttcatcaagctgcgcgacggtgctgcgccgttc
acgctggacgaactcaaggcgctgctcgccggcaagctcggcaagcacgaaattcccgcc
gcgctggaattcgtcgacgaactgccgcgcaccccggtcggcaagctgtcgcgccatgaa
ttgcgcaaccggcagccggcgccgggaaagcaaccgcaactcgtatccggaagtcgttaa
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