Bradyrhizobium sediminis: KMZ68_24225
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Entry
KMZ68_24225 CDS
T08500
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsei
Bradyrhizobium sediminis
Pathway
bsei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KMZ68_24225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsei03019
]
KMZ68_24225
03009 Ribosome biogenesis [BR:
bsei03009
]
KMZ68_24225
Enzymes [BR:
bsei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KMZ68_24225
Messenger RNA biogenesis [BR:
bsei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KMZ68_24225
Ribosome biogenesis [BR:
bsei03009
]
Prokaryotic type
rRNA helicases
KMZ68_24225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QWG18022
UniProt:
A0A975NMW0
LinkDB
All DBs
Position
complement(5082592..5084544)
Genome browser
AA seq
650 aa
AA seq
DB search
MTFSTTVPPLARALAERNYDQLTAVQTAVLADQAGGRDLLVSAQTGSGKTVAYGLAVAEN
LLDGAERFERAAAPLALIVAPTRELALQVQRELAWLYQYADARVVSCVGGMDPRREQREL
AAGAHIVVGTPGRLCDHLRRGRLDVSELKAVVLDEADEMLDLGFREDMEFILKTTPDSRR
TLLFSATLPRGIIALAKQYQRDAFRVEVAGDEGGHADIEYRAIRIVPGDVEHAVVNVLRF
FESPSALVFCNTRNAVRHLQATLLERGFSVVALSGELTQNERTQALQALRDGRARVCVAT
DVAARGIDLPNLDLVIHSDLPNDPEVMQHRSGRTGRAGRKGVSVLLVPPARKRRAELLLN
LAGIDAVWGTAPTAEEIRKLDQERMLKDTLFAEENTAEDLVLAQAMLAERTPEDIAAALA
RLYRARLPSPEDILDPGQGGGRSRDDRGRERDRAPSRGEDRAGAPRPKPGKSSPRHGMAE
GSVWFRAAIGRRKNAEARWLLPMICRRGGIDKQDIGAIRIMDTTTEFEISARAAESFAAM
IRRPDKEDNIRIEPLAGAPQAPMEKPSHPRREAHEGGRSDRRNERPREEREPKPHGKPHR
QGGPEFAREPGFEKKRHRDRPAHAGQAQHTGAPAAKAAFGKKKKKKNRQA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtgacattttcgaccacagttccgccgcttgcccgggcgttagccgaacgcaactatgat
caactgaccgccgtgcagaccgccgtgctggcggaccaggccggcggccgcgacctgctg
gtttcggcgcaaaccggctccggcaagaccgtcgcctatgggctcgccgtcgccgagaac
cttctcgacggcgccgagcggttcgagcgggcggccgcgccgctggctttgatcgtggcg
ccgacccgcgagctcgccttgcaggtgcaacgcgaactcgcatggctctatcaatatgcc
gatgcgcgcgtggtttcctgcgtcggcggcatggatccgcgccgcgagcagcgcgagctg
gccgccggcgcccacatcgtggtcggcacgcccggccggttgtgcgatcacttgcggcgc
ggccgtctcgacgtctcggagttgaaggccgtcgtgctcgacgaggccgacgagatgctc
gatctcggctttcgcgaggacatggagttcatcctcaagaccacgccggacagccgacgc
acgctgctgttctcggcgaccctgccgcgcggcatcatcgcgctggccaagcagtatcaa
cgcgacgcctttcgcgtcgaggtcgcgggcgacgaaggcggccatgccgatatcgagtac
cgcgccatccggatcgtcccgggcgatgtcgagcacgcggtcgtcaacgtgctgcgcttc
ttcgaatcgccgagcgcgctggtgttctgcaacacccggaacgcggtgcggcatctgcag
gcgacgctgctggagcgcgggttctccgtggtcgcgctgtcgggcgaattgacgcagaac
gagcgaacccaagcgttgcaggcgttgcgggacggacgcgcgcgcgtctgcgtcgccacc
gacgtggcggcgcgcggcatcgacctgccgaatctcgacctcgtcattcactccgacctg
ccgaacgacccggaggtgatgcagcaccgttccggccgcaccggccgtgccggccgcaag
ggggtcagcgtgctgctggtgccgccggcgcgcaagcggcgcgcggaattgctgctgaat
ctcgcaggcatcgacgccgtctggggcacggctcccacggcggaagaaatccgcaagctc
gatcaggagcgcatgctgaaggacaccctgttcgcggaggagaacaccgccgaggacctg
gtgctggcgcaggccatgctcgccgagcggacgccggaggatatcgcagcggcgctggcg
cggctctatcgcgcgcggctgccttcgccggaggacatactcgatcccggccagggcgga
ggccgatcgcgtgacgatcgcggccgggaaagagatcgcgcgccgtcgcgaggcgaggat
cgcgccggcgcgccgcggccgaagccgggaaaatcgtcgccgcgtcacggcatggcggag
ggcagcgtgtggttccgcgccgccatcggccggcggaagaacgcggaagcgcgctggctg
ctgccgatgatctgccgccgcggcggcatcgacaagcaggacatcggcgccatccgcatc
atggacaccaccaccgagttcgagatttccgcacgggccgcggaatccttcgccgccatg
atcaggcgccccgacaaggaagacaacatccgcatcgagccgctggcaggcgcgccacag
gcaccgatggaaaagccttcgcatccccggcgcgaggcgcatgagggcggtcgcagcgat
cgccgcaacgaacgtccccgcgaggagcgagagccgaagccgcacggcaagcctcatcgc
cagggcgggccggaatttgccagggagcccggtttcgagaagaagcgacaccgggacagg
ccggcccatgccggacaggcgcagcataccggcgcgcctgcagcgaaagccgcgttcgga
aagaagaaaaagaagaagaatcgccaagcctga
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