Buttiauxella selenatireducens: RHD99_02555
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Entry
RHD99_02555 CDS
T09954
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsel
Buttiauxella selenatireducens
Pathway
bsel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHD99_02555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsel03019
]
RHD99_02555
03009 Ribosome biogenesis [BR:
bsel03009
]
RHD99_02555
Enzymes [BR:
bsel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RHD99_02555
Messenger RNA biogenesis [BR:
bsel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RHD99_02555
Ribosome biogenesis [BR:
bsel03009
]
Prokaryotic type
rRNA helicases
RHD99_02555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
WMY74885
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All DBs
Position
534093..536060
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AA seq
655 aa
AA seq
DB search
MTDIIETTTIETTFTDLGLNASILKALNDLGYEKPSPIQAECIPQLLAGRDVLGMAQTGS
GKTAAFSLPLLHNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQR
YDVQLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNLKGLVLDEADEMLRMGFIEDVETIM
AQIPEGHQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVHGMRKNE
ALVRFLESEDFDAAIIFVRTKNATLEVAEALEQSGYNSAALNGDMNQALREQTLERLKDG
RLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRER
RLLRNIERTMKLTIPEVELPNRELLSERRLAKFAAKVQQQLESSDLDLYRGLLAKIQPTA
EEELDMETLAAALLKMAQGERPLILPPDAPMRPRREFRERDERFERSDRAPRGDRAPRGD
RPERSDRPQRDGDAPRRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGN
IKLFGTHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLMGDAQPRTDRGGERRGGGAGRG
FGGGERREGGRGPRRDGPGAGTGAPRSFSGERREGGRGPRREDGSAPARRRTTEA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgactgatatcatcgaaactactaccatcgaaactacttttaccgatctggggctgaac
gcctccatccttaaagccctgaacgatctgggttatgaaaaaccatctccaatccaggca
gaatgtattccacaactgctggctggccgcgatgtactgggtatggcccagacgggtagc
ggcaaaactgcagcgttctctttaccgttgctgcataaccttgatccagagctgaaagca
ccacaaatcctggtgctggcaccgacccgcgaactggcggttcaggttgctgaagccatg
acggatttctctaaacatatgcacggcgtaaacgttgtggccctttacggtgggcagcgt
tatgacgtgcaactgcgcgccctgcgtcagggaccacaaattgttgttggtaccccaggc
cgcctgcttgaccacttaaaacgcggtacgctgaacctgtctaacctgaaaggtctggta
ctggacgaagcagatgaaatgctgcgtatgggcttcatcgaagacgttgaaaccatcatg
gctcagatcccagaaggtcatcagaccgctctgttctctgcaactatgccagaagcgatt
cgtcgtattactcgtcgtttcatgaaagatccacaggaagttcgcattcaatctagcgta
acgactcgtccggacatcagccagagctactggactgtgcacggtatgcgtaagaacgaa
gcgctggttcgtttcctggaatctgaagattttgatgcggcgatcattttcgtacgtacc
aaaaacgcaactctggaagtggctgaagcgctggaacaaagcggctataacagcgcagca
ttgaacggtgacatgaaccaggcactgcgtgagcagactctggagcgtctgaaagatggt
cgtctggacatcctgattgcaaccgacgttgcggcccgtggccttgatgttgagcgtatc
agtctggttgtgaactacgacatcccaatggactccgaatcttacgttcaccgtatcggt
cgtaccggtcgtgcgggtcgtgctggccgtgcgctgctgttcgttgagaaccgtgagcgt
cgtctgctgcgtaacatcgaacgcaccatgaagctgactattcctgaagtagagctgcca
aaccgtgaactgctgagcgagcgtcgtctggctaagttcgcagctaaagttcagcagcaa
ctggaaagcagcgatctggatctgtaccgtggcctgctggcaaaaattcagcctaccgct
gaagaagagctggatatggaaacgctggcagcagcattgctgaaaatggcacagggcgaa
cgtcctctgatcctgccaccagatgcgccgatgcgtccacgtcgtgaattccgtgaacgt
gatgagcgtttcgaacgttcagatcgtgctccacgtggcgaccgtgcaccacgcggtgat
cgtccagagcgttcagatcgtccacagcgtgatggcgatgcaccacgtcgcgaacgtcgt
gatgttggcgatatggaactgtaccgcattgaagttggccgtgatgatggtgttgaagtt
cgtcacattgttggcgctatcgctaacgaaggcgacatcagcagccgttacatcggtaac
atcaagctgtttggtacccactccaccatcgagctgccaaaaggcatgccaggtgaagtt
ctgcagcactttacccgtactcgtattctgaacaaaccaatgaatatgcagctgatgggt
gatgcacaaccacgtactgaccgtggtggcgaacgtcgtggcggtggtgctggtcgtggt
ttcggtggcggtgaacgtcgtgaaggcggtcgcggtccacgtcgtgatggtcctggtgct
ggtactggcgcaccacgtagcttcagcggcgaacgtcgtgaaggcggtcgtggcccacgt
cgtgaagatggctcagctccggctcgtcgtcgtaccactgaagcataa
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