Buttiauxella selenatireducens: RHD99_10865
Help
Entry
RHD99_10865 CDS
T09954
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsel
Buttiauxella selenatireducens
Brite
KEGG Orthology (KO) [BR:
bsel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsel03032
]
RHD99_10865 (topA)
03400 DNA repair and recombination proteins [BR:
bsel03400
]
RHD99_10865 (topA)
Enzymes [BR:
bsel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RHD99_10865 (topA)
DNA replication proteins [BR:
bsel03032
]
Prokaryotic type
DNA Topoisomerases
RHD99_10865 (topA)
DNA repair and recombination proteins [BR:
bsel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHD99_10865 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WMY76385
LinkDB
All DBs
Position
2352462..2355059
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTTKKSADSASTKGTKKVK
KDERGALVNRMGVDPWHNWEAQYEVLPGKEKVVSELKSLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDTRYSRVVFNEITKNAIQQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVDREREIKAFVPEEYWEVDANLTTPKGDSLPVQVSH
HKDKPFRPVNREQTMSAVSELEKARYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVSMVRGYIEENFGKKYLPAAANQYSSKEN
SQEAHEAIRPSDVGVVAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVQAGDF
RLKTRGRTLRFDGWTKVMPALRKGDEDRTLPAVEQGDELALVDVVPGQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMESSLDQVANNQAEWKGVLDNFFSDFSEQLGKAELDPEEGGMRPNQMVLTSIDCP
TCSRQMGIRTASTGVFLGCSGYALPVKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCTKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDDCKNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDAEGNKAVVRFSRKTKQQYV
SSEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaacaaatat
ctcggcaatgactacgtggttaaatccagcgtcggtcatatccgtgatttgccgaccagt
ggatcaaccaccaagaagagcgctgactccgcctcgaccaaagggaccaaaaaggtcaaa
aaggatgaacgcggcgcgctcgtaaatcgtatgggtgtcgatccatggcacaactgggaa
gcacaatacgaagtgctgcctggtaaagaaaaagtggtttcagaactgaagtcgctggct
gaaaaagcagaccatatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagttatcggtggcgacgacacacgctatagccgcgttgtgtttaac
gaaattacgaaaaatgccattcaacaggcatttgaaaagccgggcgaattgaacatcgac
cgtgttaacgcacagcaagcgcgtcgttttatggaccgcgttgtgggttacatggtgtcg
ccactgctgtggaagaaaattgcccgtggtttatctgccggtcgcgttcagtctgttgct
gtgcgtctggttgttgaccgcgaacgcgaaattaaagcgttcgtacccgaagaatattgg
gaagttgatgcgaatctgacgacgccgaaaggtgacagtctgccggttcaggtcagccac
cataaagacaaaccgttccgtccggttaaccgcgagcagaccatgtctgcggttagcgaa
ctggaaaaagcacgttattccgtgcttgagcgtgaagataaaccaaccagcagcaaacct
ggtgcgccgtttattacctccacgttgcagcaggctgcaagtacccgtcttggttttggc
gtgaagaaaaccatgatgatggctcagcgtctgtatgaagcgggtcatattacttacatg
cgtaccgactcaaccaacttgagccaggatgcagtgagcatggtgcgtggttatatcgag
gagaatttcggtaagaaatatcttccagctgccgcgaaccagtattccagcaaagaaaac
tcgcaagaagcgcacgaagcgattcgtccttctgacgtgggtgtggttgccgagtcgctc
aaggatatggaagctgacgcgcaaaaactttaccagctgatctggcgtcagtttgttgcg
tgtcaaatgacacctgcacaatacgactccaccaccttaacggtgcaggcgggtgatttc
cgtcttaaaacgcgtggccgtacgctgcgttttgatggctggactaaggtcatgcctgcg
ctgcgcaagggagacgaagaccgtacattgccagctgttgagcagggtgatgaactggcg
cttgttgacgtcgtaccggggcaacactttactaaaccacctgctcgttttagcgaagct
tcgttggtaaaagagttagaaaaacgaggtatcggccgtccgtctacttacgcatcaatc
atttccactatccaggatcgtggctatgtgcgtgtagagaaccgccgtttctatgctgaa
aaaatgggtgaaattgttaccgatcgcctggaagaaaacttccgtgagctgatgaattac
gattttaccgcgcaaatggaaagcagcctcgaccaggtagccaataatcaggctgagtgg
aaaggggttctggataacttcttcagtgatttcagtgagcagcttggtaaagctgagctg
gatccagaagaaggcggtatgcgtccaaaccaaatggttctgacaagcatcgattgccca
acgtgtagccgtcaaatgggtatccgtaccgccagtaccggcgtgttcctgggttgctcc
ggttatgcattgccagttaaagagcgctgcaaaaccaccattaacctggtgccggaaaac
gaagtcctcaacgtacttgaaggggatgacgcggaaaccaacgctctgcgcgcgaaacgt
cgctgtactaaatgcggtaccgcgatggacagctacctgattgatccaaaacgtaaacta
cacgtgtgtggtaataacccaacgtgtgacggttacgagatcgaagagggtgagttccgc
atcaaaggttatgacggcccaatcgttgaatgtgagaaatgtggttctgaaatgcacctg
aaaatgggtcgttttggtaagtacatggcgtgtacgaacgacgattgtaaaaatacccgt
aagatcctgcgtaatggcgatgtggctccaccgaaggaagatcccgttccattaccagaa
ctgccttgcgagaagtcagacgcttactttgtattgcgcgatggtgcggcgggtgttttc
cttgcggcaaacacattccctaaatctcgtgaaacacgtgcgccactggttgaagaactg
taccgcttccgcgatcgcttgccagaaaaactgcgttatctggcagatgccccacagcaa
gatgctgaaggtaacaaagcggttgtgcgctttagccgtaaaactaagcagcagtatgtt
tcttccgaaaaagaaggcaaagcgaccggttggtcagcgttctttgtggatggtaagtgg
gttgaagggaagaaataa
DBGET
integrated database retrieval system
