Buttiauxella selenatireducens: RHD99_10960
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Entry
RHD99_10960 CDS
T09954
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bsel
Buttiauxella selenatireducens
Pathway
bsel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bsel00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHD99_10960 (pdeR)
Enzymes [BR:
bsel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
RHD99_10960 (pdeR)
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Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GGDEF_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
WMY76402
UniProt:
A0ABY9SK78
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All DBs
Position
complement(2371473..2373464)
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AA seq
663 aa
AA seq
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MKDDLEQNLLYRYLGTTSPYWRLPGDSNALQLAASEDSDVSQVIALAPEQAEQIRQMTVI
TSSVTMSISLFGSEVSVHLVGRKVSKKEWAGSASAWNDTPSVARDLVQGLSFAEQVVSEA
NSVIVILDRLGNIQRFNRLCEEYTGLKEQEVIGQNVFKLFMSRSEAAASKRNISGFFRNG
NSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAINDLITASIENRGETQVGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLDDGQILARLGGDEFIVLATDTSQATLEAMSSRILTRLKQPFRIGLIEVYTGCSLGI
SLAPQHGEDRESVIRNADTAMYTAKESGRGKFCVFSPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKMTWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVMLSVV
QQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLDFEYCPIDVELTESCLIENE
ELALSVIQQFSRLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQSVSQSLV
RAIVAVAQALNLQVIAEGVENQKEDAFLTKNGVNERQGYLFAKPMPAAVFERWLKRYQAR
TAR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgatttggagcagaatctgctctaccgttatttagggacaaccagcccatat
tggcgtttgccaggcgatagcaatgcgctgcaattagcagccagtgaagactcagatgtt
agccaggtcattgctttggctcctgaacaggctgaacaaattcgccaaatgacggtgatt
acctcaagtgtaaccatgtcaatttcgttgtttggcagtgaagtttctgtgcatctggta
gggcgtaaagtctcaaaaaaggagtgggctggctccgcgtcggcatggaacgacacccct
tctgttgcacgtgatttggtgcaagggctctcttttgcagaacaggtggtctcagaggcg
aactcagttatcgtcattctcgacagattagggaatatccaacgctttaaccgcttgtgt
gaagaatataccggtcttaaagaacaagaggtcattggccaaaacgtatttaagttattc
atgagtcgcagtgaagccgccgcatccaaacgcaatatcagcggtttctttcgcaacggt
aactcttatgaagttgagcgctggataaaaacccgcaagggccagcggttgtttttattc
cgcaataaattcgttcacagtggtagcggtaagaacgaaatctatctgatctgttctggt
actgacattaccgaagaacgccgtgcacaagagcgtctgcgagttctggcgaataccgac
accatcacgggtctgcccaatcgcaatgccattaatgacttgattaccgcctcgattgaa
aatcgtggtgaaactcaggtaggcatcgtttatctggatctcgataactttaaaaaagtg
aacgacgcatatgggcacatgttcggcgatcagcttttacaggcggtttcgttagctatt
ttaagttgtcttgatgacgggcaaattctggctcgccttggcggtgatgagtttattgtg
ttggcgaccgacacttcgcaagccactctggaagcgatgtcgtcgcgtattttgacgcgc
ctgaagcaacctttccgcatcggtttaattgaagtctacaccggttgttcattaggtatt
tcactggctccccagcacggtgaagaccgtgaaagcgtgattcgcaacgcggataccgca
atgtataccgccaaagagagtggccgcggtaagttctgcgtcttctcgccggaaatgaac
cagcgggtctttgaatacttgtggctcgataccaacttgcgtaaggctctggaaaacgac
cagcttgtcatccactatcagccgaaaatgacctggcgcggtgaagtcagaagcctggaa
gcattagtgcgctggcaatcaccagagcgtggtttgatccctccactggactttatctcc
tatgccgaagagtccggactgattgttccgcttggccgctgggtgatgttaagtgtggtt
caacaggtcgcgaaatggcgcgataaaggcatcaatttacgtgttgcggtgaacgtatct
gcgcgtcagttagccgaccaaactatctttagcgatctgaagcaagctctcaaagatctc
gactttgaatactgcccgattgatgtcgaactgacagaaagctgtttgattgagaacgaa
gagttagccctttcggtgattcaacagttcagtcgtcttggtgcgcaagtgcatttagat
gacttcggcacgggctattcttcgctttctcagctcgctcgtttcccgatagacgccatt
aagctcgaccaaagttttgtgcgcgatattcataaacaatcggtttcccaatcgcttgtt
cgtgccatcgttgcggttgcgcaagctttgaatttgcaggtgattgctgaaggggtcgaa
aaccaaaaagaagacgcctttctaacaaagaatggcgtcaacgaacggcagggttactta
tttgctaaaccaatgcccgcagccgtattcgaacgttggttaaaacgatatcaggcaaga
accgcgcgttaa
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