Buttiauxella selenatireducens: RHD99_11125
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Entry
RHD99_11125 CDS
T09954
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bsel
Buttiauxella selenatireducens
Brite
KEGG Orthology (KO) [BR:
bsel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsel03016
]
RHD99_11125
Enzymes [BR:
bsel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RHD99_11125
Transfer RNA biogenesis [BR:
bsel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RHD99_11125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
OSR1_C
ODP
Motif
Other DBs
NCBI-ProteinID:
WMY76433
LinkDB
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Position
complement(2404763..2406697)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
SAVIHTDKDRETAEPEELIEPFLSRFVGRVQRKDDRLSIVPDHPLLRDAIQCRADRNVTH
DFQNGDWAVAEMKRHPLKGDRGFYAELTQFITFGDDHLAPWWVTLSRHNLEREAPNGVAT
EMLDEGLVREDLTALDFVTIDSASTEDMDDALFVEELADGKLQLTVAIADPTAWIAEGSK
LDNIAKVRAFTNYLPGFNIPMLPRELSDDLCSLRPNVTRPVVACRMVIAQDGTIDDQINF
FVATIESKAKLAYDDVSDWLEEKGDWQPPGEAIAKQIRLLERVCQSRADWRRTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANVCAAIVLREKLGFGVYNVHTGFD
PANTEQLATMLQGHGLEVDAQEVLTLNGFCKLRRELDAQPTSFLDSRIRRYQSFAEISTE
PGPHYGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETATRPQDEITVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHTVRDE
LVCSQESGTVQIKGEVAFKVTDVIDVTIAEVRMETRSVIARPAI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagcttaaacagcaactgcattcccaaactcca
cgtgttgaaggcgtggttaaaggcacggaaaaaggctttggcttcctcgaagtggatgcc
cagaaaagttactttattccgccgccgcagatgaaaaaagtgatgcatggtgaccgcgtg
agcgcggtgattcacaccgacaaggaccgcgaaaccgctgagccagaagagcttatcgaa
ccgttcctcagccggtttgttggccgtgtacaacgtaaagacgaccgcctgtctatcgtg
ccggatcatccgttattacgcgatgcgattcagtgtcgcgccgatcgtaacgtgacgcat
gacttccagaatggtgactgggccgttgcagaaatgaagcgccacccgcttaaaggcgac
cgtggtttctacgctgaattgacgcagttcatcaccttcggcgacgatcaccttgcgcca
tggtgggtgacactgtcacgccacaatctggagcgcgaagcccctaacggtgtagcaact
gaaatgttggatgaaggcctggtgcgtgaagatttaaccgccctggatttcgttaccatt
gatagcgccagcaccgaagatatggatgatgcgctgttcgtagaagagctggccgatggc
aagttgcaactgacagttgctattgccgaccctactgcctggattgcagaaggcagcaag
cttgacaatattgctaaagttcgcgcattcaccaactacttgccgggctttaacatcccg
atgctgccacgcgagttgtctgacgacttgtgttcattgcgtccaaatgtcacgcgccct
gtcgttgcttgccgcatggttatcgcgcaagacggtacaattgacgatcaaattaacttc
ttcgtggccactatcgaatcaaaagccaaactggcttatgacgatgtttccgattggctg
gaagaaaaaggcgactggcagccaccaggcgaggctattgctaagcaaatccgtctgtta
gagcgtgtttgccagagccgtgctgactggcgtcgtacccatgcgctggtgttcaaagat
cgccctgattaccgctttgtattgggtgaaaaaggcgaagtgctggatatcgtcgcggag
ccacgtcgtatcgcgaaccgcatcgttgaagaatcaatgattgctgccaacgtctgtgca
gcaattgtgctgcgtgaaaaactcggtttcggtgtttataacgtccataccggttttgac
ccagcgaatactgaacaactcgcaaccatgctgcaaggccatggactggaagttgatgcg
caagaagtgctgaccctgaacggcttctgcaaactgcgccgtgagctcgatgcgcaaccc
accagtttcctggacagccgcattcgtcgctaccagtcgtttgctgaaatcagcaccgag
cctggcccgcattacggtcttggcctggaagcttatgcaacctggacgtcacctattcgt
aaatacggcgacatgatcaaccatcgcctgttaaaagcgatcatcaaaggtgaaaccgcg
acgcgtccacaggatgaaattaccgtacagatggctgagcgtcgccgcctgaaccgcatg
gcagaacgtgatgtcggtgattggctatatgctcgcttcctgaaagacaaagctggaacg
gatactcgttttgctgctgaaatcattgatgtcagccgtggcgggatgcgtgttcgtttg
gttgataacggcgcggttgcttttatccctgccccgttcctgcacaccgttcgtgacgaa
ctggtttgcagccaggaaagtggcacggttcaaatcaaaggtgaagtcgcattcaaagtc
actgatgtgattgatgtgacaatcgcagaagtgcgaatggaaacgcgtagcgtgattgct
cgccctgccatttaa
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