Buttiauxella selenatireducens: RHD99_15270
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Entry
RHD99_15270 CDS
T09954
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bsel
Buttiauxella selenatireducens
Pathway
bsel03030
DNA replication
bsel03430
Mismatch repair
bsel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHD99_15270 (holB)
03430 Mismatch repair
RHD99_15270 (holB)
03440 Homologous recombination
RHD99_15270 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsel03032
]
RHD99_15270 (holB)
03400 DNA repair and recombination proteins [BR:
bsel03400
]
RHD99_15270 (holB)
Enzymes [BR:
bsel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHD99_15270 (holB)
DNA replication proteins [BR:
bsel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHD99_15270 (holB)
DNA repair and recombination proteins [BR:
bsel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHD99_15270 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
DUF6587
EPF
Motif
Other DBs
NCBI-ProteinID:
WMY72826
UniProt:
A0ABY9S5N5
LinkDB
All DBs
Position
complement(3301867..3302874)
Genome browser
AA seq
335 aa
AA seq
DB search
MKWYPWLRAPFEQILSQYQAGRGHHALLLHSLSGMGDDALIYALTRWLMCQQPQGTKSCG
QCRSCQLMQAGTHPDSYVVAPEKGKSSLGIDAIREITEKLYSHAQQGGAKVVWLEDAGLL
TEAAANALLKTLEEPPANTWFFLGCREPARLPATLRSRCLYWYLTPPDETFAQAWLAREI
SLDREQIRAALRLSSGAPAGALALLQPEQWKHRQTLCEKLNEACATKNMLGLLPALNSDD
ATVRIHWLCSVLVDALKWQQGATPWLTNDDQQALVVNLANSATPAILQAILHNWFACREA
LLSVVGVNRELLLTEQLLTWERLMQPGAVLPSFHL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccatggttacgcgcgccctttgaacaaattctcagccagtatcaggct
gggcgcgggcaccatgcattgctgcttcattcattatccggcatgggtgatgacgcatta
atctacgcactcacgcgctggttgatgtgccagcaaccacaaggcaccaaaagctgtggt
caatgccgcagttgccagttgatgcaggctggaacacatcctgacagctacgtggtcgca
cctgaaaagggtaaatccagtcttggcatcgatgctattcgtgagataactgaaaagctg
tacagtcacgcccaacagggtggggcaaaagtcgtctggctggaagatgctgggcttctc
actgaagccgcagcgaatgcgctgctgaaaaccctcgaggagccacctgcaaatacctgg
ttcttcctcgggtgtcgtgaaccggcgcgtttacccgccacgttacgcagtcgttgtttg
tactggtatctgacaccacccgatgaaacttttgcgcaggcctggcttgctcgagaaatc
tctctggatcgtgagcaaatacgtgctgcgctgcgtttgagttctggtgctcctgcaggc
gccctggcgttgcttcaacctgagcagtggaaacatcgccagacgttgtgcgaaaaactt
aatgaagcttgcgcgactaagaatatgctggggttgttgcccgcgctcaacagtgatgat
gctaccgttcgcatccactggttatgctctgtattggtggatgcactaaaatggcagcaa
ggcgcaacgccctggctgactaatgatgatcaacaagcattggtcgtaaatcttgccaat
agcgcgacaccggcgatactccaggccattctgcacaattggtttgcctgccgtgaagca
ttgctcagcgttgttggcgtgaatcgtgaattactcctgactgaacaattactcacctgg
gagcgtttaatgcaacccggtgcagtccttccttccttccatctttaa
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