Buttiauxella selenatireducens: RHD99_17120
Help
Entry
RHD99_17120 CDS
T09954
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bsel
Buttiauxella selenatireducens
Pathway
bsel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHD99_17120 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsel03019
]
RHD99_17120 (rhlE)
Enzymes [BR:
bsel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RHD99_17120 (rhlE)
Messenger RNA biogenesis [BR:
bsel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RHD99_17120 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WMY73171
UniProt:
A0ABY9S6M7
LinkDB
All DBs
Position
complement(3719097..3720470)
Genome browser
AA seq
457 aa
AA seq
DB search
MSFDSLGLNADILRAVEEQGYREPTPIQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLL
QRLVNKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLDIRSLVVFGGVSINPQMM
KLRSGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDDIKGLAEKLLHNPEEVSVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKNGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKREVPRMALPGYEVDPSIPAEPIVNGRQQQRGGGRGNGSGQGQGQRRGGNGGGAAS
DRSNAPRRPSRPQGDGAPKPAGANGRRRPPRKPAASN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattctctcggcctgaacgccgatattctgcgtgcagtggaagagcagggc
tatcgtgagcctacccctattcaacgccaggcgatcccggtcgtcttagcaggtcgtgac
ctgatggccagtgcccaaaccggcaccggcaaaacggcaggttttaccttgccgctgtta
cagcgcctggtcaataaagaaccgcacgccaaaggccgccgcccggtgcgcgcgctgatc
ctgacgccaacccgtgagcttgccgctcagattggcgaaaacgtgcgtgactacagcaaa
tatttagatatccgctcgctggtggttttcggcggcgtgagcattaacccgcagatgatg
aaactgcgtagcggtgtggatgtgctggtggcaacaccgggccgtctgttagatctggaa
caccagaacgccgtgaaactcgaccaggtcgaaatcctggtactggacgaagctgaccgc
atgctggacatgggcttcatccacgatattcgtcgcgtactggccaaactgccagcacgt
cgccagaacctgctgttctccgcgaccttctcggacgacatcaaagggctggcagaaaaa
ctgctgcataacccggaagaagtgtctgttgcgcgccgcaacacggcttctgagcaagtc
actcaacacgttcatttcgttgataagaaacgtaaaagagaactgctgtcccagatgatt
ggcgaaggtaactggcagcaagtgctggtgtttacccgtaccaaacatggtgcgaaccac
ctggcagagcagctgggtaaagacggtatcaccgcggcggcaattcacggtaacaagagc
cagggcgctcgtacgcgtgcattggctgacttcaaaaacggtggcattcgtgtgctggtt
gcaacggacatcgcggcacgtggccttgatatcgaagagttgccacatgttgtgaactac
gagttgccaaacgtaccagaagattacgtgcaccgtattggtcgtactggtcgtgcagcg
gcaacgggtgaagcgctgtctttggtttgtgttgatgaacacaaactgttgcgcgacatc
gagcgcctgctcaagcgcgaagttccgcgtatggcactcccaggctatgaagtggatcca
tccattcctgctgaaccgatcgttaatggtcgccagcaacagcgtggcggcggtcgtgga
aacggcagcggtcaaggccaggggcaacgtcgtggtggcaatggcggcggtgcagcgtcg
gatcgcagtaatgcgccgcgccgtccatcacgtccacaaggtgatggtgcgccaaaacct
gcgggtgctaacggacgtcgtcgtccaccgcgtaagccagcggcttcaaactaa
DBGET
integrated database retrieval system
