Buttiauxella selenatireducens: RHD99_19655
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Entry
RHD99_19655 CDS
T09954
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bsel
Buttiauxella selenatireducens
Pathway
bsel03030
DNA replication
bsel03430
Mismatch repair
bsel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHD99_19655 (dnaE)
03430 Mismatch repair
RHD99_19655 (dnaE)
03440 Homologous recombination
RHD99_19655 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsel03032
]
RHD99_19655 (dnaE)
03400 DNA repair and recombination proteins [BR:
bsel03400
]
RHD99_19655 (dnaE)
Enzymes [BR:
bsel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHD99_19655 (dnaE)
DNA replication proteins [BR:
bsel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHD99_19655 (dnaE)
DNA repair and recombination proteins [BR:
bsel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHD99_19655 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WMY73634
LinkDB
All DBs
Position
complement(4275044..4278526)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMVDGLAKTAPLVKKAAAMGMPAIAITDFTNLCGLVKFYGAAHGA
GLKPIIGADFNVANELLGDELSHLTVLASDNAGYQNLTLLISKAYQRGYGAAGPIVDRSW
LAELNEGLILLSGGRMGDIGKNLLRGNTAQLDQCLEFYQQYFADRFYLELIRTGRPDEES
YLHAAVALADERGLPVVATNDVRFIEATDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYL
RTEEEMCELFSDIPEAMENSVEIAKRCNVTVRLGEYFLPQFPTGEMSTEDFLVMKSREGL
EDRLEFLFKDPEERAAKRPPYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDIDFCMEKRDRVIDHVAE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDDQGQNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKIVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARADVKKLNKRILEKLVMSGAFDRLGPHRAALMN
ALPDALKAADQHAKAEAIGQVDMFGVLADEPEQVEQSYASVIPWPEQVVLDGERETLGLY
LTGHPITQYLKEIERYVGGMRLKEMHPTERGKMTTAAGLVIASRVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGAAWRVSPSD
RLLNELRTLIGPEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacaccttcgggtgcacagcgactactctatggttgatggc
ctggcaaaaaccgctccgctggtgaagaaagccgcggcgatggggatgccagcaatcgct
atcaccgattttacgaacctttgcgggttggtgaaattctatggtgctgctcatggtgca
gggctcaaaccgatcatcggggctgattttaacgtagccaatgagttgttaggtgatgag
ctcagccatctaaccgttctcgccagcgataatgccggctatcaaaaccttaccctgcta
atttcaaaagcctaccagcgtgggtatggcgctgcgggcccgattgttgaccgaagctgg
cttgccgaactcaacgaggggctaatcctgctctctggtgggcgcatgggggatattggc
aaaaacttgttgcgtggaaatacggcacagcttgatcagtgcctggaattttaccagcag
tattttgccgatcgcttctatctggagctgattcgtaccggtcgtcccgatgaagaaagc
tatttgcacgctgccgtggctcttgctgatgaacggggtttgccggtggtggcgaccaac
gatgtcaggtttatcgaagccacagactttgatgcccacgaaatccgcgttgcgattcat
gatggctttacacttgatgacccgaaacgcccacgcaattactcttcgcagcaatatttg
cgcactgaagaagagatgtgtgagctgttttccgatatcccggaagcgatggaaaacagt
gtagaaatcgccaagcgttgtaatgtcacggtacgcctcggcgagtacttcctgccacaa
ttcccaaccggcgaaatgtcgacagaagatttcctggtgatgaaatccagggaagggtta
gaagatcgcctggaattcttattcaaggatcctgaagaacgcgccgcaaaacgaccacct
tatgacgaacgtctggaaatcgagcttaaagttatcaaccagatggggttcccaggctac
ttcctgatcgtaatggaatttatccagtggtcgaaagataacggcgtgccggttgggccg
ggtcgtggttctggtgcgggttcactggtcgcttacgcactgaaaattaccgatctcgat
cctttggagtttgatctgcttttcgaacgcttccttaacccggaacgtgtttcgatgcct
gacttcgatatcgacttctgtatggaaaaacgtgaccgggttatcgatcacgtggcagaa
atgtacgggcgcgaagcggtatcacagatcatcaccttcggtacaatggcggcaaaagcg
gttatccgcgatgtgggtcgtgtactggggcatccttacggttttgtcgatcgtatttcc
aaactcatcccaccagatccagggatgacgcttgcgaaagcctttgaggccgagccgcag
cttcctgaaatttatgaggctgacgaagaagttaaagcgctgatcgacatggcgcgcaaa
cttgaaggtgtgacgcgtaacgccggcaaacacgccggtggtgtggtcattgcacccaca
aaaattaccgattttgcaccactttattgtgacgatcagggacaaaacccggtcacccag
tttgataaaaacgatgtggaatatgcaggcctggtgaagttcgacttcctcggtttgcgt
acactgacgatcatcgactgggcgttgaagatgattaacccgcgtcgggaaaagcagggt
ttagagccgattgatatcgccgctattccgctcgacgacaagaaaagcttcgacatgctg
caacgctcggagaccactgcggttttccagcttgaatcccgcggcatgaaagatctgatt
aagcgtctgcagccggactgcttcgaagatatgatcgcgttggtagcacttttccgtcca
ggcccgttgcaatcaggcatggtagataactttatcgaccgtaagcatgggcgagaagcg
atctcttatccggatattcaatggcagcatgaaagcctgaaacctgtgctggagccgacc
tacggcatcatcctgtaccaggaacaggttatgcagattgcgcaggtgctggcgggttat
tcgctaggcggcgcggatatgttgcgtcgtgcgatgggtaaaaagaacccggtcgaaatg
gcgaagcaacgtggtggttttgaagatggtgcgaagtctcgtggcgttgatggcgaactg
gccattaaaatctttgacctggtagagaaatttgccggttatggatttaacaaatctcac
tccgcagcttatgcgctggtttcataccagactctgtggttaaaagcgcactatcctgca
gaatttatggccgcagtaatgactgcggatatggataacaccgagaaaattgttggcctg
gtggatgaatgctggcgcatgggcctgaaaatactgccaccggatattaactccgggctg
taccatttccacgtgaatgacgacggggaaattgtttacggtattggcgcgattaaaggt
gttggcgaaggtccaatcgaagcgataattgaggcgcgtaacgaaggcggatatttccgc
gaattgttcgacctctgtgcgcgtgctgacgttaaaaaactcaataaacgcatccttgaa
aaattagtgatgtccggggcgtttgaccgccttgggccacaccgggcagcacttatgaat
gcgctgcccgatgcgctgaaagctgctgatcagcacgctaaagccgaggctatcggccag
gtggatatgtttggcgttctggcagatgagccggagcaggtcgaacagtcttatgccagc
gtaattccgtggcctgagcaagtggtactggacggtgaacgtgaaacgttgggcttgtat
cttaccggccacccgattacccagtacctgaaagaaattgagcgttatgtcggtggcatg
cgcctgaaagagatgcacccgacagaacgtggtaaaatgaccacggctgcgggtctggtg
attgcttcgcgggtgatggttaccaagcgcggcaatcgtattggcatctgtactctggat
gaccgttctggtcgtctggaagtgatgctattcacagatgcgttagaaaagtaccaacat
ctgttggaaaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgacttcagc
ggtggccttaaaatgaccgctcgcgaagtaatggacattgacgaggcccgcgaaaagtat
gcgcgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttgaaccgt
ctccgtcagtctctggaaccccatcgttcggggaccattccagtacatctctactatcag
agagcggatgcacgagcgcgtttgcgttttggcgcagcatggcgtgtatccccaagcgat
cgtttgctcaatgagcttcgcacgctgataggcccggagcaggtggaactggagtttgac
taa
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